Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00388 ATGTTTGCGGAGACGACGACGCCGACGCCGACGCCCACGGCCGCAGGAGCATCCTTACGGTACAGTGGTGTGTTTTTGAAAAGATGTTTCAAGCCCAGCCTAGTGGTTATGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTAGACACGAAGCTTGCTTTATCTATTGCCAAAACTAAACAGAAACCTTGTAAGGAACTGAAGTTTTCTTCTTCTAGAGGAATGTCGATATCACATATTTCTGCAGCAGCATCCCCATATCTATCTGGGGAACAAGGCAGTCTATTCCATAAACTTCCACTTTTGCCTCCACGAAATTATGCTAAAAAGGGTCCTCGAGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTCACCCAAAAACCAAAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCATGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCCGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGTGTTGTGAGGAATAAAGAATTGCCTCATTTCATTCGGTTCCATGTCATGATGGGGATGTTATTAGAAACCTCGCTTGACATCATATGGTATGCTAGCAATTTCATGCCACTCATACATTACAATGGTACATACGCAATGCAATATTGGGCTGCAGTGGCGTTCATCTACATTTCCAGCTTGTTAGTGTGTATAAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAG 879 43.0 MFAETTTPTPTPTAAGASLRYSGVFLKRCFKPSLVVMPQCRRLGSANLDTKLALSIAKTKQKPCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRNYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFIRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF* 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2777253 2779266 + Chy1G003880.1 Chy01g00388 217569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00388 292 Pfam Chloroplast import apparatus Tic20-like 111 277 IPR005691 -
Chy01g00388 292 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 42 292 IPR005691 -
Chy01g00388 292 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 42 292 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00388 Chy-Chr1:2777253 Chy11g01717 Chy-Chr11:23578925 3.17E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00388 - - csv:101219652 580.096