Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00394 ATGGTGGCCAAAAGAAGTAGTGTCAAGAAATTGGTCACCATCAGCTGGTTTGCAGAGCATTTGATGTCTCTTTTCCATTTGTACTCATTTGTGTTTCTAATTTTGGTTGTTAATTGCTTTGCTAAAGATACCTTAGAGTTTAAGAGTTGCATAAGTCATGGGAGTGGGGATACTCTTGTATCGGCAGGGTCGAGGTTCGAATTTGGATTCTTTCAGCCATATGGCAGCTCTCATAGCAGAAGATACTTGGGAATATGGTATTGCAAATCAAATCCAATTACGGTTGTTTGGGTTGCCAATCGAGACAGACCACTTCCTGGTTCAGATGGTGTCTTGAAGATCGAGGATGATGGCAACCTCAAAGTATATGATGGAAATCAGAATCTTTATTGGTCAACAAACATTGGAAGTTCTGTACCTAATCAAAGGACCCTGAAACTAATGGATAATGGAAATCTGGTTTTAAGCTATGTAGATCAAGAAGACTTGTCTGAGCACATCCTCTGGCAAAGTTTTGATTATCCAACTGATACATTTCTTCCTGGCATGTTAATGGACGATAACTTGGTGCTGGCTTCATGGAAGAGCTATGATGACCCGGCTCAAGGGAACTTCACTTTTCAGTTAGATCAGGACGGAGGTCAATATGTCATTTGGAAAAGATCAGTTAAATTCTGGAAAAGTGGAGTTTCAGGTAAGTTTATTACCACTGATAAGATGCCTGCTGCATTGTTATACCTTTTGTCAAATTTCTCATCGAAAACTGTCCCAAACTTCTCTGTGCCACATCTCACATCATCATTGTATATTGATACAAGGCTAGTATTGAACAGCTCAGGTCAGCTTCATTACCTAAACTGGGAAGATCACAAAGTTTGGTCTCAGATTTGGGTGGAGCCGAGAGATAGATGCAGTGTGTATAATGCGTGTGGAGATTTTGCTAGCTGTAATAGTGAGGGTGATATGGCTTGCAAATGCCTGCCTGGTTTTGAGCCTACCTCTCCAGGGAGTTGGAATATTGGAGATTATTCAGGTGGATGCATTAGGAAATCTCCAATATGCAGTGTGGATGCTGACAGTGACACTTTTTTGAGTCTAAAGATGATGAAAGCTGGAAACCCGGACTTCCAGTTTAATGCAAAGGATGACTTTGATTGCAAATTGGAGTGCCTTAACAACTGCCAGTGTCAGGCTTACTCGTATTTGGAAGCTAATATCACAAGGCAGAGTGGGAATTATAATTCTGCTTGTTGGATTTGGTCTGGAGATCTCAACAATCTTCAGGATGAGTTTGATGATGGTCGTGACCTCAATGTTCGAGTAGCAGTTAGAGACCTAGAATCAACTGCCAGAAACTGTGGAACATGTGGGACAAACCTCATTCCTTATCCACTTAGCACAGGACCTAAATGTGGTGACCCCATGTACTTCAATTTTAACTGCAACTTGGCTTCTGGCCAGGTAAACTTTGAAGCAGCAGGTGGAACATACAAGGTTAAATTCATTGATTCAGAAGCACGAAAATTTTACATCCAAACCAAGGAACCGGGTGATTGTGGTGATAAAAACTGGACAACCAAAGCCCTTCAGCTGAACCAGTCATCTCCTTTCCGTGTAACCAGCTGGTGCAACTTTAAGGAGACCAATCCCGAGGAAAAATTTTCTCTGAAAACTAGCAATGAAGTTGAAATCAGTTGGGAGCCTCCACTAGAGCCAATTTGTTCTTCAACTACGGACTGCAAAGACTGGCCTTATTCAACTTGCAACATGAGTAAAGATGGAAATAAAAGATGCCTTTGCATAACAGACTTTCATTGGAATGGCTGGAGCTTGAATTGCACTACAGATCACAACAAAAGAAAGGATGGAAGAGGCAAAACGACCTTTTCTGTGATTATTGTTGCAACATCCTTATGTATGGTCCTTCTGATGAGTCTCTCATGTACCGTATTTTACATTTACTTCTCCAAAAGTGGGCTCATTGAAAGACAAGAAAGCAGGGGAAACAGCCAAAAAGATTTAATGCTTCACTTGTACGATAATGAGAGACGTGTCAAAGACCTGATTGAATCCGGTCGATTCAAGGAAGATGATACAAATGGAATAGACATTCCATTTTTTGATTTGGAAACCATTCTAGTTGCAACAGATAACTTCTCAAATGCAAACAAGCTTGGCCAGGGAGGCTTTGGGCCAGTTTACAAGGGCAAGTTTCCTAGTGGGCAGGAGATTGCTGTAAAGAGGCTTTCAAGTGGTTCAGGGCAAGGCTTTGAGGAGTTTAAGAATGAGGTTTTATTAATTGCTAAACTTCAGCATCGAAATCTCGTTAGACTCTTGGGCTACTGTGTTGAAGGAGATGAAAAGATGTTGCTTTATGAATATATGCCAAATAAAAGCTTAGACGCCTTTATATTTGATCAAAAGATGAGCGTGGCATTGGATTGGGACATACGCTTCAACGTCATTTTGGGAATTGCTCGTGGCCTTCTTTATTTACACCAAGATTCGAGGTTGAGAATTATTCATAGAGATTTGAAGGCAAGCAATATTCTTCTAGATGAGGAGATGAATCCCAAAATATCCGACTTTGGTTTGGCGAGGATATTTGGAGGGAAAGAAACTGCCACAAATACTAAAAGGGTGGTAGGCACTTATGGATACATGTCACCAGAGTATGCATTGGATGGGATATTTTCTGTCAAATCTGATGTCTTTAGCTTCGGTGTAGTCGTAATCGAGATCATTGGTGGAAAAAGGAACACTGGATTCTTTCACTCGGAGAAAGCTTTGAGTCTCCTGGGCTATGCTTGGGATTTATGGATGAAAGACGAAGGCTTGGATTTAATGGAGCAAACACTAAGCGGGAATTGCAAACGAGATGAATATTTGAAGTGTTTAAATGTGGGGCTGTTGTGCGTGCAGGAAGATCCATGGGATCGACCCACCATGTTGAATGTGGTCTTCATGCTCGGCAGCGAAACCGCAACTCTTCCATCTCCAAAACCACCAGCTTTCGTCGTACGGCGGTGCCCCTCAAGCAGAGCTTCCTCCTCCACCAAACCAGAAACCTTCTCCCATAATGAGTTGACAGTCACCTTACAAGATGGTAGATAG 3114 41.75 MVAKRSSVKKLVTISWFAEHLMSLFHLYSFVFLILVVNCFAKDTLEFKSCISHGSGDTLVSAGSRFEFGFFQPYGSSHSRRYLGIWYCKSNPITVVWVANRDRPLPGSDGVLKIEDDGNLKVYDGNQNLYWSTNIGSSVPNQRTLKLMDNGNLVLSYVDQEDLSEHILWQSFDYPTDTFLPGMLMDDNLVLASWKSYDDPAQGNFTFQLDQDGGQYVIWKRSVKFWKSGVSGKFITTDKMPAALLYLLSNFSSKTVPNFSVPHLTSSLYIDTRLVLNSSGQLHYLNWEDHKVWSQIWVEPRDRCSVYNACGDFASCNSEGDMACKCLPGFEPTSPGSWNIGDYSGGCIRKSPICSVDADSDTFLSLKMMKAGNPDFQFNAKDDFDCKLECLNNCQCQAYSYLEANITRQSGNYNSACWIWSGDLNNLQDEFDDGRDLNVRVAVRDLESTARNCGTCGTNLIPYPLSTGPKCGDPMYFNFNCNLASGQVNFEAAGGTYKVKFIDSEARKFYIQTKEPGDCGDKNWTTKALQLNQSSPFRVTSWCNFKETNPEEKFSLKTSNEVEISWEPPLEPICSSTTDCKDWPYSTCNMSKDGNKRCLCITDFHWNGWSLNCTTDHNKRKDGRGKTTFSVIIVATSLCMVLLMSLSCTVFYIYFSKSGLIERQESRGNSQKDLMLHLYDNERRVKDLIESGRFKEDDTNGIDIPFFDLETILVATDNFSNANKLGQGGFGPVYKGKFPSGQEIAVKRLSSGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKMSVALDWDIRFNVILGIARGLLYLHQDSRLRIIHRDLKASNILLDEEMNPKISDFGLARIFGGKETATNTKRVVGTYGYMSPEYALDGIFSVKSDVFSFGVVVIEIIGGKRNTGFFHSEKALSLLGYAWDLWMKDEGLDLMEQTLSGNCKRDEYLKCLNVGLLCVQEDPWDRPTMLNVVFMLGSETATLPSPKPPAFVVRRCPSSRASSSTKPETFSHNELTVTLQDGR* 1038
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2800963 2804689 + Chy1G003940.1 Chy01g00394 217575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00394 1037 Pfam D-mannose binding lectin 94 188 IPR001480 -
Chy01g00394 1037 Gene3D Phosphorylase Kinase; domain 1 684 794 - -
Chy01g00394 1037 Gene3D - 39 172 IPR036426 -
Chy01g00394 1037 CDD PAN_AP_plant 354 442 - -
Chy01g00394 1037 CDD STKc_IRAK 725 990 - -
Chy01g00394 1037 Pfam Protein tyrosine and serine/threonine kinase 722 987 IPR001245 GO:0004672|GO:0006468
Chy01g00394 1037 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 200 IPR036426 -
Chy01g00394 1037 CDD B_lectin 54 175 IPR001480 -
Chy01g00394 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Chy01g00394 1037 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 37 1034 - -
Chy01g00394 1037 ProSiteProfiles Bulb-type lectin domain profile. 44 168 IPR001480 -
Chy01g00394 1037 SMART serkin_6 719 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00394 1037 Pfam Domain of unknown function (DUF3403) 992 1037 IPR021820 GO:0004674
Chy01g00394 1037 Gene3D Transferase(Phosphotransferase) domain 1 795 997 - -
Chy01g00394 1037 ProSiteProfiles Protein kinase domain profile. 719 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00394 1037 Pfam S-locus glycoprotein domain 226 333 IPR000858 GO:0048544
Chy01g00394 1037 Pfam PAN-like domain 358 426 IPR003609 -
Chy01g00394 1037 MobiDBLite consensus disorder prediction 1011 1037 - -
Chy01g00394 1037 SUPERFAMILY Protein kinase-like (PK-like) 703 1020 IPR011009 -
Chy01g00394 1037 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 1034 - -
Chy01g00394 1037 ProSiteProfiles PAN/Apple domain profile. 354 442 IPR003609 -
Chy01g00394 1037 SMART blect_4 54 175 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00394 Chy-Chr1:2800963 Chy04g00612 Chy-Chr4:6894298 5.22E-56 dispersed
Chy08g00726 Chy-Chr8:15034953 Chy01g00394 Chy-Chr1:2800963 3.14E-08 transposed
Chy12g01435 Chy-Chr12:18358815 Chy01g00394 Chy-Chr1:2800963 6.71E-116 transposed
Chy01g00394 Chy-Chr1:2800963 Chy12g00986 Chy-Chr12:15140058 3.58E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70971 PF07714 PK_Tyr_Ser-Thr 3.70E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00394 - - csv:101217751 2111.65