Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00415 ATGGCCATTACTCCAAAGCTTTTCTTCCTTCTCCTTTTGCAGCTAATATTTGTATCAACATCTCTCTCGAACATCGCCGGAGCAAATGAGTTGGCGGTCGGGTTTTACCAGAATTGCTGCCCTGGGGTGGAGTATATCGTCGCCAAGACGGTGGCTCAATTTGTTAAGAAACAACCATCAATAGCTGCTTCTTTGTTGAGGATACACTTCCATGACTGCTTTGTTAGGGGATGTGATGGTTCAGTGCTGCTAAATTCCCTACCAAATAACCCAGCCGAGAAAGATGCCATTCCCAACCTTAGTTTAAAAGGTTATAATGTTGTTGATGCCGTTAAAGCTGCCGTTGAAAAGCAATGCCCTGGTGTTGTTTCTTGTGCTGACATCCTTGCTTTGATAGCTCGTGATGCTGTTAGAATGAGTGGAGGCCCAGTTTGGGAAGTTCCAACGGGAAGAAGGGACGGAACTGTATCAATCTCACGAGAAGCATTAATTAACTTGCCTCCTCCTTTCGCTAATATCTCTTCTCTCAAATCAAGTTTCCAATCCAAAGGTCTCTCCCCCAAAGATCTTGTCGTGTTATCCGGAGCACATACAATCGGAGTCTCCCACTGTACCTCTTTCTCCAATCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCCAAACTAGACAAATACTACGCGGCCGCACTCAAGATCAAATGCAAACCAAATGACCAAAAAAAAATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTCGATCAAAGTTATTACACTCTCGTTTCCAAGAGAAGAGGATTGTTCCAGTCTGATTCCGCTCTTCTCGACGATCCTGATACTAAAGCCTACGTTCAGTTTCAGGCTCGTACACGTGGCGCTACATTCGCCGCCGATTTCGCTGAATCCATGGTTAATATGGGGAATATCGGCGTTCTCACCGGTTCCGACGGTGAAATTAGGCGCCGATGTGGTTTTGTTAACTGA 990 46.06 MAITPKLFFLLLLQLIFVSTSLSNIAGANELAVGFYQNCCPGVEYIVAKTVAQFVKKQPSIAASLLRIHFHDCFVRGCDGSVLLNSLPNNPAEKDAIPNLSLKGYNVVDAVKAAVEKQCPGVVSCADILALIARDAVRMSGGPVWEVPTGRRDGTVSISREALINLPPPFANISSLKSSFQSKGLSPKDLVVLSGAHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAAALKIKCKPNDQKKIVEMDPGSFKTFDQSYYTLVSKRRGLFQSDSALLDDPDTKAYVQFQARTRGATFAADFAESMVNMGNIGVLTGSDGEIRRRCGFVN* 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2928050 2929740 - Chy1G004150.1 Chy01g00415 217596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00415 329 Gene3D Peroxidase, domain 2 167 308 - -
Chy01g00415 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601|GO:0042744
Chy01g00415 329 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 Pfam Peroxidase 47 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PANTHER PEROXIDASE 25-RELATED 11 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 SUPERFAMILY Heme-dependent peroxidases 31 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 Gene3D - 34 329 - -
Chy01g00415 329 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Chy01g00415 329 ProSiteProfiles Plant heme peroxidase family profile. 30 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy01g00415 329 PANTHER PEROXIDASE 11 328 - -
Chy01g00415 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00415 Chy-Chr1:2928050 Chy01g01797 Chy-Chr1:23557232 5.12E-97 dispersed
Chy01g01798 Chy-Chr1:23565434 Chy01g00415 Chy-Chr1:2928050 2.70E-87 dispersed
Chy01g00864 Chy-Chr1:7630000 Chy01g00415 Chy-Chr1:2928050 7.50E-75 transposed
Chy02g00544 Chy-Chr2:3277477 Chy01g00415 Chy-Chr1:2928050 5.99E-94 transposed
Chy03g01036 Chy-Chr3:13880093 Chy01g00415 Chy-Chr1:2928050 8.40E-91 transposed
Chy06g00900 Chy-Chr6:6580789 Chy01g00415 Chy-Chr1:2928050 2.25E-89 transposed
Chy08g00310 Chy-Chr8:7301002 Chy01g00415 Chy-Chr1:2928050 4.37E-84 transposed
Chy11g01459 Chy-Chr11:21358776 Chy01g00415 Chy-Chr1:2928050 2.42E-102 transposed
Chy12g00679 Chy-Chr12:9854359 Chy01g00415 Chy-Chr1:2928050 3.26E-73 transposed
Chy01g00415 Chy-Chr1:2928050 Chy11g00594 Chy-Chr11:6782609 1.03E-123 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00415 K00430 - csv:101219177 618.616