Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00417 ATGTGGGAGCCATCACGTAAGCCAAAATCAACGAGTGAGATTCCATCGTCGGCCTGGGAGATGAAACGTTCAGGATTGTGGTCAGGAATGAAGATGAAACGTTTAGAGCAGCTGAATTTAAGAGCTCATAGCTTTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGACCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACATTCCTTGTGCAGGCTGGTATTGTGAAGAAGGAAAACATCAAGATTCACGGTTTCTAA 516 44.19 MWEPSRKPKSTSEIPSSAWEMKRSGLWSGMKMKRLEQLNLRAHSFCWLPVFYSGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF* 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2935645 2940615 + Chy1G004170.1 Chy01g00417 217598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00417 171 Gene3D - 53 171 - -
Chy01g00417 171 Pfam Translation initiation factor SUI1 86 160 IPR001950 GO:0003743|GO:0006413
Chy01g00417 171 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 59 171 - -
Chy01g00417 171 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 59 171 - -
Chy01g00417 171 SUPERFAMILY eIF1-like 56 171 IPR036877 GO:0003743|GO:0006413
Chy01g00417 171 CDD eIF1_SUI1 87 170 IPR005874 GO:0003743
Chy01g00417 171 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 64 171 IPR005874 GO:0003743
Chy01g00417 171 ProSiteProfiles Translation initiation factor SUI1 family profile. 89 159 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00417 Chy-Chr1:2935645 Chy06g01817 Chy-Chr6:21865087 4.78E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00417 K03113 - csv:101219651 228.409