Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00422 | ATGGTTAATTTTGTTCCTCTCTCTCTGCTCTTTGTGTTTCATGCTTTCATATGCCTCTTTCACTTCACTCCTCCGATCTACTGCCAAATTCCTTCTATCATAAACATCGCTGCCGTTTTTACTTTCGATTCCGTCATCGGAAGAGCTGCTAAGCCGGCCATGGAAGCTGCAATCTCCGATATAAACGCCGACCCCAATATCTTGAATGCCACAAAGCTTAACTTTTTCATGGAAGACTCTAATTGCAGTGGCTTCTTGGGCTCCGTTCAAGCTTTGCAGGTACTTGAGAAAGAGATTGTGGCCATGATTGGCCCACAATCCTCAGTAGTGGCTCATTTGATTTCTCAGATTGTTAATGGTCTACAAATTCCTCTAGTATCTTATGCTGCCACTGATCCTACATTATCCACTTTGCAACTCCCTTTTTTCCTCAGAACCACTATAAGCGACTCTTACCAAATGGCTGCCATGGCTGACTTGATTGATTACTATGGCTGGAAAGAAGTCATTGTTATATTTTTGGATGATGATTATGGTAGAAATGGGATATCTTTTCTGGGTGATGAACTTCAGAAGAAAATGTGCCGTATTTCCCATGCGTTCCCTTTACCTTCTCTGGATAATCTTACTAAGATCACACAAATACTCAACAATTCTAAATTACTTGGTCCTCGAGTTTATGTAGTTCATGTAGGCACTGATCCCCAATTAAGAATCTTCACTATTGCCCATAAACTCGGTATGCTTTCAAGCAATTATGTTTGGTTCGCAACTGATTGGCTTTCCACAACTCTTGATTCTTCTTCACCAATAACCAATGGTGCTTCACTTGATATGCTTAATGGGGTTGTTGGGTTGCGCCCTCATACTCCAGAGTCTAAAGGAAAGAGAGATTTGTGGGATCGGTTAAGCAAAATGCAGCCAAAAGGTTTAACTAATTCTGCGTTGAATGTTTATGGACTTTATGCTTATGATTCAGTATGGGTTGTTGCAAAGGCAGTGGATAAGTTTCTTAAAGAAAATGGGAATATCATTACATTTTCACCCACAGGTAAAGTGTTGGGCTCTAATGAAAGTGGAATTCAATTGGGTAATGTTAAAGTGTTTGATAGAGGGAGTGATTTACTTAAAATTCTTATGCAAACTGATTACAATGGTTTAAGTGGGAGAATTCAGTTTGGTGAAGACAGAAGTGTTGTTAATGGTAGCTTCGATGTGATTAATATTAACCAAAGGGAAATGAATTTGGTGGGTCATTGGTCTAATGACTTAAGATTTCATCCTAACTTCGATCAGAAACTTAAGAAAGTGGTTTGGCCTGGTGGGAAGGAGGAGATACCAAGGGGATGGGTGATAGCAGATAGTGGAAAACCTTTGAGAATTGCTTTCCCAAGAAGAGCAAGCTTTGTTGATTTTGTAACTCAATTGAACAACACCAATATTGTTCGAGGATATGTTATTGATATTTTCAAAGAAGCTCTCAAGTTTGTTCCATATGAAGTTCCTTACAAGTTTGTGCCTTTTGGAGATGGTAAAGTTAATCCCAGTTATGATGAACTTGTTCATTCGGTTGCAAATAATGTGTTTGATGCAGCAGTTGGGGACATTGCAATCGTTACGAACCGAACCAAAGTTGTTGATTTTTCTCAACCATATACCACAACAGGGCTGATCATAGTTGCACCAGTTGAAGATTCAAAATCAAGTGCTTGGGTGTTCCTTCAACCATTTACAGTAGAGATGTGGTGTGCAACTGCAGGTTCCTTTGTGGTAATTGGTATTGTTATTTGGATGTTAGAGCATAGAATCAACGACCATTTTCGAGGTCCTCCAAAAAGACAAATTATCACAATGTGTTTGTTTAGCATTTCAACTCTTTTCAAGGCAAATCAAGAAGCAACAATAAGCCCACTCTCACGACTAGTGATGTTGGTGTGGCTGTTCTTATTATTGGTAATAACCTCAAGCTACACAGCAAGTTTGACATCAATCCTTACACTCCAACAACTTTGGTCTCCAATACGAGGAATTGATGACTTGGTTGCAAGTAATTTGCCAATTGGATATCAAGTAGGATCCTTTGCTTACGACTATCTCACACAAAGCCTTTTCATTCCAAGTTCAAGACTGCAGAGGCTGAACTCCTCTGAAGACTACGAGAAAGCACTGCACCTTGGCCCAAAAGGAGGCGGCGTGGCGGCCATCATCGATGAACTTCCGTACTTGGAGTTGATTCTGTCAAAGACTAAAGAATTTGGAATCATTGGTCAACCTTTTACCAGGAGCGGATGGGGATTTGCTTTTCAACGAGGATCTCGACTTGCAGTCGATATGTCAACTGCAATTCTGAAGCTCTCGGAGAGCGGAAAGCTTCAAGAAATACATGACTTGTGGTTCTGCAAGCTAGGGTGTCCAGGTAATCGGGAAGGAAAGTCGGAGCCAGACCAACTTCACTTGATCAGTTTCTGGGGTTTGTATTTGCTTTGTGGAATCATTTCCCTCGCTGCACTCTTCCTGTTTCTTTTAAGACTAATCCGCCAGTATATCCGTTACCTACGACACCATCGACGACGTCATTCAGAAGAAGTTACACCATTCCCAGTTCCATCCAATACTAGCTGTACTCAGACGATTCAAAACTTTATAGACTTTATTGATGAGAAAGAAGAAGCTATCAAAAGCTTCTTTGGATCATCACATGGTGCTCAAAATGGGAACCAACTTCACAATCATTCCGAAAAAGCCAAGGAGAAGGCTGATTCAGAGATACAGATAGGGCCCACGACCATGGGTATGAATCGAGGATAG | 2808 | 40.78 | MVNFVPLSLLFVFHAFICLFHFTPPIYCQIPSIINIAAVFTFDSVIGRAAKPAMEAAISDINADPNILNATKLNFFMEDSNCSGFLGSVQALQVLEKEIVAMIGPQSSVVAHLISQIVNGLQIPLVSYAATDPTLSTLQLPFFLRTTISDSYQMAAMADLIDYYGWKEVIVIFLDDDYGRNGISFLGDELQKKMCRISHAFPLPSLDNLTKITQILNNSKLLGPRVYVVHVGTDPQLRIFTIAHKLGMLSSNYVWFATDWLSTTLDSSSPITNGASLDMLNGVVGLRPHTPESKGKRDLWDRLSKMQPKGLTNSALNVYGLYAYDSVWVVAKAVDKFLKENGNIITFSPTGKVLGSNESGIQLGNVKVFDRGSDLLKILMQTDYNGLSGRIQFGEDRSVVNGSFDVININQREMNLVGHWSNDLRFHPNFDQKLKKVVWPGGKEEIPRGWVIADSGKPLRIAFPRRASFVDFVTQLNNTNIVRGYVIDIFKEALKFVPYEVPYKFVPFGDGKVNPSYDELVHSVANNVFDAAVGDIAIVTNRTKVVDFSQPYTTTGLIIVAPVEDSKSSAWVFLQPFTVEMWCATAGSFVVIGIVIWMLEHRINDHFRGPPKRQIITMCLFSISTLFKANQEATISPLSRLVMLVWLFLLLVITSSYTASLTSILTLQQLWSPIRGIDDLVASNLPIGYQVGSFAYDYLTQSLFIPSSRLQRLNSSEDYEKALHLGPKGGGVAAIIDELPYLELILSKTKEFGIIGQPFTRSGWGFAFQRGSRLAVDMSTAILKLSESGKLQEIHDLWFCKLGCPGNREGKSEPDQLHLISFWGLYLLCGIISLAALFLFLLRLIRQYIRYLRHHRRRHSEEVTPFPVPSNTSCTQTIQNFIDFIDEKEEAIKSFFGSSHGAQNGNQLHNHSEKAKEKADSEIQIGPTTMGMNRG* | 936 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2975575 | 2981020 | - | Chy1G004220.1 | Chy01g00422 | 217603 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00422 | 935 | Gene3D | - | 149 | 422 | - | - | |
Chy01g00422 | 935 | Gene3D | - | 452 | 569 | - | - | |
Chy01g00422 | 935 | SUPERFAMILY | Periplasmic binding protein-like I | 28 | 451 | IPR028082 | - | |
Chy01g00422 | 935 | Pfam | Receptor family ligand binding region | 51 | 410 | IPR001828 | - | |
Chy01g00422 | 935 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 19 | 904 | - | - | |
Chy01g00422 | 935 | PANTHER | GLUTAMATE RECEPTOR 3.7 | 19 | 904 | - | - | |
Chy01g00422 | 935 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 238 | 261 | - | - | |
Chy01g00422 | 935 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 107 | 135 | - | - | |
Chy01g00422 | 935 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 47 | 63 | - | - | |
Chy01g00422 | 935 | Pfam | Ligand-gated ion channel | 800 | 831 | IPR001320 | GO:0015276|GO:0016020 | |
Chy01g00422 | 935 | Gene3D | - | 570 | 702 | - | - | |
Chy01g00422 | 935 | SMART | GluR_14 | 460 | 801 | IPR001320 | GO:0015276|GO:0016020 | |
Chy01g00422 | 935 | MobiDBLite | consensus disorder prediction | 900 | 935 | - | - | |
Chy01g00422 | 935 | CDD | GluR_Plant | 457 | 799 | - | - | |
Chy01g00422 | 935 | PIRSF | IGluLR_plant | 1 | 929 | IPR017103 | - | |
Chy01g00422 | 935 | Gene3D | - | 53 | 401 | - | - | |
Chy01g00422 | 935 | CDD | PBP1_GABAb_receptor_plant | 35 | 426 | IPR044440 | - | |
Chy01g00422 | 935 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 478 | 799 | IPR001638 | - | |
Chy01g00422 | 935 | SUPERFAMILY | Periplasmic binding protein-like II | 445 | 799 | - | - | |
Chy01g00422 | 935 | Gene3D | - | 746 | 806 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00422 | Chy-Chr1:2975575 | Chy11g00606 | Chy-Chr11:7129683 | 0 | dispersed | |
Chy01g00422 | Chy-Chr1:2975575 | Chy11g00602 | Chy-Chr11:6997659 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00422 | K05387 | - | csv:101203158 | 1769.98 |