Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00438 | ATGGCCTGGACCCGACGATCCCCCGTCGGCAATGGCTCCTCCGCCACCGTCTACCTCGCCTCCACTGCCTCCTCCGGCCAACTATTTGCTGTCAAGTCCGCCGAGCTTCTCAAATCAGACTTCTTGAAAATAGAGCAAAGGGTTCTTTCTTCCCTGTCCAACCCTTCAATTGTCGGCTACAGGGGATTCGATGTAACCACAGAAAATGGGAAGCTAATGTACAATCTCTTCATGGAGTACGCTGCCGGTGGTACTCTCACTGATGAGATATTCCGGCGTGGTGGCCGGATTAAGGAGCCAACGGCGGCGTTTTACACGCGTGAAATTGTTAGAGGATTGGAGTACTTGCACAAACAGGGGTTGGTGCATTGTGATATCAAAGCTAAGAACATTTTAATTGCTGGAGATGGTTTGAAGATTGCTGATTTTGGATGCTCCAGATGGGTTTGTGAGGCCGAGGCAGTAATAGGCGGAACGCCGATGTTCATGGCACCGGAGGTGGCGCGTGGGGAAAAACAGGGGATTTCCTCTGACATATGGGCACTTGGGTGTACATTAATCGAAATGGTCACCGGCGCTCCACCATGGAAAATTACCGACGACCCAGTTTCGGTGTTGTACCGGATCGGATATTCTGGCGAGTCTCCGGAAATTCCGAGCTTTCTGTCGGAGAAAGGAAAGGATTTTTTAAGGAAATGCTTGAGAAGGGAAGCAACAGAAAGATGGAGTGCGAGTCAACTTCTTGAACATCCATTTTTGGGGGAATTGAGTTCTGGGTTGGAGGAAATCAAGGAATTACATTTATATTCTCAATCTCCGACGAGTATTTTAGATCAAAGCCTCTGGAATTCCTTAGAAGAAGAATCAGAAACTTTGTTGAGAACAGAGCAATGGGAGGATGACAGAATCGAACGGCTGGCTACGTTTTCAGGAGAAATTAAGTGGGAATTGGGAGACGAGAATTGGATCACAATCAGAAGCTATGTAGATGGTGAAGATGAAGATGAATTAAGTTTTAGTAGAAATGATTTAGACTTAGTGGAAGAGGGAAGAATAGTTAGTGAGAAAATCCAGTATTTGGAATTGTTAGATAAAACAGTTAGCTTTAGAGTAAGGTAG | 1119 | 46.02 | MAWTRRSPVGNGSSATVYLASTASSGQLFAVKSAELLKSDFLKIEQRVLSSLSNPSIVGYRGFDVTTENGKLMYNLFMEYAAGGTLTDEIFRRGGRIKEPTAAFYTREIVRGLEYLHKQGLVHCDIKAKNILIAGDGLKIADFGCSRWVCEAEAVIGGTPMFMAPEVARGEKQGISSDIWALGCTLIEMVTGAPPWKITDDPVSVLYRIGYSGESPEIPSFLSEKGKDFLRKCLRREATERWSASQLLEHPFLGELSSGLEEIKELHLYSQSPTSILDQSLWNSLEEESETLLRTEQWEDDRIERLATFSGEIKWELGDENWITIRSYVDGEDEDELSFSRNDLDLVEEGRIVSEKIQYLELLDKTVSFRVR* | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3150118 | 3151236 | - | Chy1G004380.1 | Chy01g00438 | 217619 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00438 | 372 | SMART | serkin_6 | 3 | 253 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g00438 | 372 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 297 | IPR011009 | - | |
Chy01g00438 | 372 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524 | |
Chy01g00438 | 372 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 1 | 336 | - | - | |
Chy01g00438 | 372 | CDD | STKc_MAPKKK | 3 | 253 | - | - | |
Chy01g00438 | 372 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 | 1 | 336 | - | - | |
Chy01g00438 | 372 | Pfam | Protein kinase domain | 5 | 253 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g00438 | 372 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 313 | - | - | |
Chy01g00438 | 372 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 121 | 133 | IPR008271 | GO:0004672|GO:0006468 | |
Chy01g00438 | 372 | ProSiteProfiles | Protein kinase domain profile. | 3 | 253 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy01g00438 | Chy11g00625 | CCT | |
Chy01g00438 | Chy11g00625 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00438 | Chy-Chr1:3150118 | Chy02g00907 | Chy-Chr2:5896049 | 3.77E-72 | dispersed | |
Chy01g00968 | Chy-Chr1:9775777 | Chy01g00438 | Chy-Chr1:3150118 | 1.20E-105 | transposed | |
Chy01g00438 | Chy-Chr1:3150118 | Chy11g00625 | Chy-Chr11:7372794 | 8.37E-123 | wgd | |
Chy01g00438 | Chy-Chr1:3150118 | Chy02g00415 | Chy-Chr2:2599132 | 6.02E-114 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
70972 | PF00069 | Pkinase | 1.70E-53 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00438 | K20716 | - | csv:101205351 | 714.146 |