Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00448 ATGAACCCTCGATTTGGGTTTTTGTTCCTGGTTTTGATCACTGTTTTGCTGGGAGCTGATTCAAAATGCCCCAGAACTTGCGATGTAGCTTTAGGTTCCTACTTCGTGTGGGAGGGTGCCAATTTGTCTTTCGTCTCTCAAATGTTTCTGTTGTCATCTCCTGATATAATCGTTAGCTACAACAGAGATAGAGTTCCCAACAAAGATAGTGTTAATAGTGGCATCAGAGTCAACCTTCCATTCACTTGCGACTGTATTGACGATACGTTTCTGGGTCATACGTTTCAGTACCAGATTAAACGTGGAGATACTTACAATGAAATTGCAACCAAATTCTATTCGGGGCTGACTACGGTGGGCATGTTACAGAGATTCAATAACTTTAATGCTCTTAATCTTCAAGAAAATCAGATTTTGAATGTGGTAGTGAACTGCTCCTGTGGAGATCCTGATATTTCGAGGACATATGGGCTGTTCGTCACTTACCCAATTCGATCCAATGATAGTTGGGATAAGTTGCGAGAAGATACAAATATCAGCCTATCTTTGCTGCAACAATACAATCAGGGTGTGAATTTCAGCCCAGGAAATTTGGTCTTTATTCCAGGAAGAGATCAAAGTGGCAACTATCCACCTCTGAATATAAGCACAGGACTTGCAGGTGGAGCCATTGCAGGCATAATTATCGGTGCAGTACTTGGGTTTCTCCTTGTAGCAGGTGCCATTTTCATTGTAATTCGAAAGAGGAAGTTGAAAAGTTCTAGATTGTTGGTGTTCTCTCAAGAACTCTCTTCGCAAGATGGGCGTGCTCTTGCCCCTGGAAGTTTGTTAGATAAATCTTCTGATACAAATGGTCAAGGTGATGGTGGTATAGCTGCTGTTACTGGTATTACAGTTGACAAATCAGTGGAATTCTCATATGAAGAACTTGCCAAGGCCACGGACGACTTTAGCTTGGGTAACAAAATCGGTGAAGGTGGATTTGGATCAGTTTACTATGCAGAACTCAGAGGAGAGAAAGCTGCAATAAAGAAGATGGATATGCAAGCTACAAGGGAGTTCCTTGCCGAAATTAAGGTTCTAACACGTGTTCACCACTTGAACTTGGTGCGCTTGATAGGATATTGTGTTGAGAATTCTCTTTTCCTAGTTTATGAGTACATTGAGAATGGCAACTTAAGCCAACACTTACGAGGCACAGGTCGAGATCCGTTGCCGTGGCCTTCTAGGGTCCAAATAGCCCTAGATTCAGCTAGAGGCCTTGAGTATATCCATGAGCACACTGTTCCTGTTTATATTCATCGTGATATTAAATCTGCCAACATATTGATTGACAAAAACTTTCATGGAAAGGTTGCAGACTTTGGGTTAACCAAACTTACTGAAGTTGGAAATTCATCGCTTCCTACACGTCTTGTGGGCACATTTGGATATATGCCACCTGAATATGCGCAATATGGAGATGTTTCTCCAAAGATCGATGTGTATGCTTTCGGTGTTGTTCTTTATGAGCTTATTTCAGCCAAGGAAGCTGTGGTCAAGACAAACAGAATGAGCGCAATCAATGAATCAAAAGGCCTTGTTGCTTTGTTTGAAGATGTTCTGAATCAACCCGACGCAAAAGAGAACCTTTACAAACTAGTCGACCCAAGACTTGAAGAGAACTACCCTCTCGATTCAGTTTTCAAGATGGCTCAGCTTGCTAAGGCTTGTACACATGAGAATCCACAGCTACGGCCAAGCATGAGATCAATTGTGGTTGCTCTCATGACTCTTTCTTCTGCAACAGAGGATTGGGATGTTGGCTCTTTCTACGAAAACCAAGCTCTTGTCAACTTGATGTCAGGAAGATAG 1854 42.13 MNPRFGFLFLVLITVLLGADSKCPRTCDVALGSYFVWEGANLSFVSQMFLLSSPDIIVSYNRDRVPNKDSVNSGIRVNLPFTCDCIDDTFLGHTFQYQIKRGDTYNEIATKFYSGLTTVGMLQRFNNFNALNLQENQILNVVVNCSCGDPDISRTYGLFVTYPIRSNDSWDKLREDTNISLSLLQQYNQGVNFSPGNLVFIPGRDQSGNYPPLNISTGLAGGAIAGIIIGAVLGFLLVAGAIFIVIRKRKLKSSRLLVFSQELSSQDGRALAPGSLLDKSSDTNGQGDGGIAAVTGITVDKSVEFSYEELAKATDDFSLGNKIGEGGFGSVYYAELRGEKAAIKKMDMQATREFLAEIKVLTRVHHLNLVRLIGYCVENSLFLVYEYIENGNLSQHLRGTGRDPLPWPSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNRMSAINESKGLVALFEDVLNQPDAKENLYKLVDPRLEENYPLDSVFKMAQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR* 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3209329 3213496 - Chy1G004480.1 Chy01g00448 217629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00448 617 Gene3D Transferase(Phosphotransferase) domain 1 388 608 - -
Chy01g00448 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Chy01g00448 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 617 IPR044812 GO:0019199|GO:0045087
Chy01g00448 617 SMART serkin_6 317 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00448 617 ProSiteProfiles Protein kinase domain profile. 317 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00448 617 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Chy01g00448 617 Pfam Protein tyrosine and serine/threonine kinase 318 588 IPR001245 GO:0004672|GO:0006468
Chy01g00448 617 CDD STKc_IRAK 323 586 - -
Chy01g00448 617 Pfam LysM domain 97 141 IPR018392 -
Chy01g00448 617 Gene3D Phosphorylase Kinase; domain 1 302 387 - -
Chy01g00448 617 SUPERFAMILY Protein kinase-like (PK-like) 300 589 IPR011009 -
Chy01g00448 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 6 617 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00448 Chy-Chr1:3209329 Chy04g00949 Chy-Chr4:13695507 8.37E-87 dispersed
Chy03g01492 Chy-Chr3:17324643 Chy01g00448 Chy-Chr1:3209329 5.90E-61 dispersed
Chy10g00876 Chy-Chr10:14569619 Chy01g00448 Chy-Chr1:3209329 3.23E-64 dispersed
Chy11g00169 Chy-Chr11:1646784 Chy01g00448 Chy-Chr1:3209329 2.65E-53 dispersed
Chy01g00448 Chy-Chr1:3209329 Chy05g01369 Chy-Chr5:17799292 5.26E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70973 PF07714 PK_Tyr_Ser-Thr 2.90E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00448 - K13429 csv:101203576 1193.33