Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00455 ATGGCACAGTTACCACCTAAGATCCCCAATATGTCTTCTAATTGGTCTGAATTTTCCCGTCAGAAAATCCCTTCCATGGAAACTTTTGCACCTACCACCACTACACCACCGGTTACTCAACAGAATCCTTCTTGGGTTGATGAATTTCTTGATTTCTCTTCCGTTAGACGTGGATCACATCGTCGGTCTGTTAGTGATTCCATCACATTCCTTGAAATGCCAATGCTGGAGGATGATTGTCGTGCCTCCGCTGCACCCCCACCACCGTCCACGGCAACCTGTGACCAGAATGAATTTGATAGATTTGATGACGAGCAATTCCTCTCGATGTTTAATGACGAAATCTCCGCTGCTGTTGCACCAACTTTGTCGTCGTCCAACCCTTCCACGCCGTCTGATCATAACAGTATTAACGATGAGAAAGATGAGCAAAACGATGGGAAGGTAAATCAGAATAAAAATGAACCCGACGAAGTACAGAGCCAACAGCAATCGGAAAATCAAACTCAATCCAATTCAACGGCGACGGCGGGTTCCACTGATCGGATAACAGACCCAAAAAGAGTGAAAAGAATTCTGGCAAATCGGCAATCGGCACAAAGATCACGAGTGAGGAAGCTTCAATACATATCAGAACTTGAACGAAGCGTTACATCATTACAGGCTGAAGTATCGGTATTGTCGCCGCGAGTGGCGTTTTTGGACCATCAGAGATTGCTTCTTAACGTCGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCTCAGGATAAGATTTTTAAAGATG 790 45.44 MAQLPPKIPNMSSNWSEFSRQKIPSMETFAPTTTTPPVTQQNPSWVDEFLDFSSVRRGSHRRSVSDSITFLEMPMLEDDCRASAAPPPPSTATCDQNEFDRFDDEQFLSMFNDEISAAVAPTLSSSNPSTPSDHNSINDEKDEQNDGKVNQNKNEPDEVQSQQQSENQTQSNSTATAGSTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDX 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3295151 3296191 - Chy1G004550.1 Chy01g00455 217636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00455 264 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 237 IPR004827 GO:0003700|GO:0006355
Chy01g00455 264 MobiDBLite consensus disorder prediction 154 181 - -
Chy01g00455 264 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 190 205 IPR004827 GO:0003700|GO:0006355
Chy01g00455 264 MobiDBLite consensus disorder prediction 1 42 - -
Chy01g00455 264 MobiDBLite consensus disorder prediction 135 153 - -
Chy01g00455 264 PANTHER BASIC LEUCINE ZIPPER 34 1 263 - -
Chy01g00455 264 SUPERFAMILY Leucine zipper domain 187 241 IPR046347 GO:0003700|GO:0006355
Chy01g00455 264 Gene3D - 186 258 - -
Chy01g00455 264 MobiDBLite consensus disorder prediction 77 107 - -
Chy01g00455 264 Pfam bZIP transcription factor 187 231 IPR004827 GO:0003700|GO:0006355
Chy01g00455 264 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Chy01g00455 264 MobiDBLite consensus disorder prediction 119 134 - -
Chy01g00455 264 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 263 - -
Chy01g00455 264 MobiDBLite consensus disorder prediction 119 188 - -
Chy01g00455 264 CDD bZIP_plant_RF2 188 238 IPR044759 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00455 Chy11g00653 CCT
Chy01g00455 Chy11g00653 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00455 Chy-Chr1:3295151 Chy10g00753 Chy-Chr10:13719995 4.35E-22 dispersed
Chy06g01143 Chy-Chr6:10013434 Chy01g00455 Chy-Chr1:3295151 8.89E-22 transposed
Chy07g00043 Chy-Chr7:404691 Chy01g00455 Chy-Chr1:3295151 5.23E-80 transposed
Chy12g00319 Chy-Chr12:3443950 Chy01g00455 Chy-Chr1:3295151 6.79E-09 transposed
Chy01g00455 Chy-Chr1:3295151 Chy11g00653 Chy-Chr11:7905677 8.80E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17273 PF07716 bZIP_2 2.50E-09 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00455 - - csv:101205276 468.774