Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00511 ATGGTTTCTACAGGGGACGGGGACCAGTTAGAGAATGAAGTTGATTCCGATCAATTGGATCATGAAAACAGTTCAGATAGTCAACCACAAGCGTCTCAGGACGATCCTGGTGGAACTAATGCATCGAAATCAGATCACAAATGCACAGGGGCTTCCAGTAATACACTTGAAGAAGCTGTCAAGCAGCCTGAGGTTACAATAGCACTAGTGGATCGAGGAGAAATCTCTAATATAGTGACTGAGAAAGTGACCCATAAGCCAATTACTGCAGAACAGAATCCCCTATCTGTTTTGAAAGTATGTATTACCTCCAGTATACGAGAGAAAGTATCAGAGGATGGATATAACTGGCGGAAATATGGTCAGAAACTGGTTAAGGGCAATGTCTTTGTTAGAAGCTATTACAGATGTACGCATCCTACTTGCATGGTGAAAAAACAACTGGAGCGCACTCATGATGGGAAAATCACAGACACTGTTTACTTTGGTCAGCATGATCACCCTAAACCTCAACCTCATATTCCAGTTCCTGTTGGAGTCGTTACCATGGTTGAAGAAAAATTAGGTGAACATGCTTCTGGAAATTCTCAAGATAAAACCTCAATTGCGCTTAGCCAGACACCTCAACAAACGGAGCTTGCTGATATGCGTCAACCACCATCAGTTATAGCCAGTGATAATGTAAAAGATGAAGCCTCGAAAAGGTCTAGGACCAATGATGAGGTTGATAGTGATGATACGCCAGACCTGAAACGAGAGAAGAAAAGATGTAACATTGACGTGACGACAGTAGCAGACAAGTCAACTGTTGAATCTCGGGTTGTTGTTCAAACTCCTAGTGAGGTTGACATTGTCAATGATGGATACCGCTGGCGGAAGTATGGACAGAAATTTGTGAAAGGCAATCCAAATCCTAGGAGTTACTACAGATGCTCAAGTCCTGGATGTCCAGTTAAGAAACATGTAGAGAGGGCGTCTCATGATCCCAAAATAGTGCTTACCACATATGAGGGCCAGCATGACCATGTTGTGCCTCCTATTAGAACAGTGACGTTGAACTCAGTTGGATCCACAACAGCCCAGAGTGACGAAACAAAACCAAAACCGGTTAGTACTGTGGTTCGTGCTAATAAGGATCCGCGAAGCGATTCAAGTTCTGAAGGCAAATTGATTGAAGAGAATGGCAAGTTGAATGCAACAGATACAAGTGATGACATTATACTCGATGGGGTGGTGGTAAATCCTAGCCCAGGAGTTGCGATTGCAAAAGCTCAGGCTACAATGACCAACCAAACCGACCTGCAAGCAGCCATGGATGAGATGAGATTAAAATCTTACCATGGCTTTGTCATACTACTCAAGATCTTAAACAACTCCAATAAAACCTTGCAAAATTCAGATATAACCTTCTTCATGCCTACTGATCAGGAACTTTCTCAAGCTGATATCTCCCTGGACCAACTCGAAGAATTCGTTTTACGCCATTCTATCCCCACAACATTACTACTCAACAATCTTTTAAACTTCCCAAATGGCAGCTTGGTTCCATCAAGCATCCCAAACAGTATGATTAAAATAACCAAAAGCAGAAAGATGGGTGTGTGTGTAAACGATGCACTCATCGTCACCCCAAACGTGTGCTTAACCTCGTCTATAAGATGTCATGGTATAAGCACAGCGATTTCGTATGACAAAACTTCCTTTTCAGATACTTTACCTGCCAAGCAAAGTTCAGCTGAAACTATAGTTCAAAGGAATGAAAAGAAAGGGGCAAAATCTTTACCGTCTACAACAATGAAGAAGAACCGTTCACTGCATTGA 1821 42.34 MVSTGDGDQLENEVDSDQLDHENSSDSQPQASQDDPGGTNASKSDHKCTGASSNTLEEAVKQPEVTIALVDRGEISNIVTEKVTHKPITAEQNPLSVLKVCITSSIREKVSEDGYNWRKYGQKLVKGNVFVRSYYRCTHPTCMVKKQLERTHDGKITDTVYFGQHDHPKPQPHIPVPVGVVTMVEEKLGEHASGNSQDKTSIALSQTPQQTELADMRQPPSVIASDNVKDEASKRSRTNDEVDSDDTPDLKREKKRCNIDVTTVADKSTVESRVVVQTPSEVDIVNDGYRWRKYGQKFVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKIVLTTYEGQHDHVVPPIRTVTLNSVGSTTAQSDETKPKPVSTVVRANKDPRSDSSSEGKLIEENGKLNATDTSDDIILDGVVVNPSPGVAIAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDITFFMPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLLNFPNGSLVPSSIPNSMIKITKSRKMGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAETIVQRNEKKGAKSLPSTTMKKNRSLH* 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3690925 3697096 + Chy1G005110.1 Chy01g00511 217692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00511 606 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 393 IPR044810 GO:0003700
Chy01g00511 606 SUPERFAMILY FAS1 domain 446 559 IPR036378 -
Chy01g00511 606 SUPERFAMILY WRKY DNA-binding domain 277 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 Gene3D FAS1 domain 416 562 IPR036378 -
Chy01g00511 606 MobiDBLite consensus disorder prediction 1 57 - -
Chy01g00511 606 SMART WRKY_cls 111 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 SMART WRKY_cls 285 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 MobiDBLite consensus disorder prediction 228 253 - -
Chy01g00511 606 ProSiteProfiles WRKY domain profile. 280 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 MobiDBLite consensus disorder prediction 190 253 - -
Chy01g00511 606 MobiDBLite consensus disorder prediction 355 396 - -
Chy01g00511 606 SMART fasc_3 469 564 IPR000782 -
Chy01g00511 606 Gene3D WRKY domain 272 338 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 MobiDBLite consensus disorder prediction 23 57 - -
Chy01g00511 606 PANTHER WRKY TRANSCRIPTION FACTOR 1 7 393 - -
Chy01g00511 606 Gene3D WRKY domain 96 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 MobiDBLite consensus disorder prediction 579 606 - -
Chy01g00511 606 Pfam WRKY DNA -binding domain 112 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 Pfam WRKY DNA -binding domain 286 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 ProSiteProfiles WRKY domain profile. 106 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 SUPERFAMILY WRKY DNA-binding domain 107 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy01g00511 606 ProSiteProfiles FAS1/BIgH3 domain profile. 430 561 IPR000782 -
Chy01g00511 606 MobiDBLite consensus disorder prediction 194 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00511 Chy-Chr1:3690925 Chy02g01672 Chy-Chr2:16368321 3.76E-64 dispersed
Chy08g00742 Chy-Chr8:15156078 Chy01g00511 Chy-Chr1:3690925 3.73E-13 dispersed
Chy01g01105 Chy-Chr1:12544305 Chy01g00511 Chy-Chr1:3690925 3.24E-66 transposed
Chy12g00595 Chy-Chr12:8449603 Chy01g00511 Chy-Chr1:3690925 9.32E-32 transposed
Chy01g00439 Chy-Chr1:3151990 Chy01g00511 Chy-Chr1:3690925 7.24E-13 wgd
Chy01g00511 Chy-Chr1:3690925 Chy06g01876 Chy-Chr6:22629322 1.86E-14 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17276 PF03106 WRKY 8.10E-26 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00511 K18834 - csv:101212482 838.18