Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00514 ATGGCCACCTCTGCTATTCAACAATCCGCCTTCGCCGGCCAGACTGCCTTGAAGCAATCCAATGAGCTTGTCCGAAAGGTCGGTGCTCTCGGTGGCGCCCGCTTCACCATGAGGCGGACAGTCAAGAGTGCTCCACAGAGCATTTGGTATGGACCTGATCGCCCAAAGTACTTGGGACCATTCTCTGAACAAACACCATCTTACCTGACTGGAGAGTTCCCTGGTGACTATGGATGGGACACAGCCGGTCTGTCAGCAGATCCCGAGACTTTTGCAAAGAATCGTGAGCTTGAGGTGATCCACTCCCGATGGGCCATGCTTGGTGCGTTAGGTTGTGTCTTCCCTGAACTCCTTGCAAAGAATGGCGTCAAGTTCGGTGAATCAGTTTGGTTCAAGGCTGGTTCTCAGATCTTCTCTGAGGGTGGTCTAGACTACCTTGGCAACCCAAACCTTATCCATGCTCAGAGTATCCTTGCAATCTGGGCTTGCCAGGTTGTGCTCATGGGGTTTGTTGAAGGTTACCGTGTTGGTGGCGGTCCCCTCGGTGAAGGACTAGACCCAATTTACCCAGGAGGTGCCTTCGACCCACTCGGATTGGCAGATGACCCAGATGCATTTGCTGAGTTGAAGGTCAAGGAACTTAAGAACGGAAGGCTGGCAATGTTCTCCATGTTCGGATTCTTTGTCCAGGCTATCGTCACCGGCAAGGGTCCTATTGAGAATCTCTTCGACCATGTTGCAGATCCTGTTGCCAACAATGCATGGGCTTATGCCACCAACTTTGTCCCCGGAAAATGA 798 52.26 MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3707462 3708641 - Chy1G005140.1 Chy01g00514 217695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00514 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Chy01g00514 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 1 265 - -
Chy01g00514 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Chy01g00514 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Chy01g00514 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00514 Chy-Chr1:3707462 Chy11g01011 Chy-Chr11:14276644 2.71E-150 dispersed
Chy07g00435 Chy-Chr7:3334144 Chy01g00514 Chy-Chr1:3707462 3.81E-33 dispersed
Chy01g00514 Chy-Chr1:3707462 Chy02g00166 Chy-Chr2:1171702 6.15E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00514 K08913 - csv:101212963 546.584