Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00528 ATGGAAACAAACTGTAGTGAATTCAACCTTGGAGATGTTCTTGACGTTGTAACAAATCAAACCATGACTTTGAGCCGAGAGCGTGAGGTGAAGATCATTTGTGAATCACTTGCCGATGTGTCATCTCTGCACTTATATGGAGATAACTTGAGGCTACAGCAAGTGCTCTCTGAGTTCTTGACGAACACGCTTCTCTTCACTTGCAAAGAATCATCTGTCATCTTTAAAGCAACTCCAAGGAAGGAGCGCATTGGGAAGGGAATCCACATTGTTCATCTTGAATTGAGGATCACCCATCCCACTCCAGGAATTCCTGCACACTTAATCCAAGAGATGTTCGACGACAACAACGATAGCTCAAAGGAAGGTCTTGGCTTATACATAAGCCAGAAGCTAGTGAAGATCATGAATGGCACTGTACAGTATCTTCGAGAGGCCGAAACCTCGTCATTCATCATCCTCATAGAATTCCCCTTGGTAGAGCATGTTGCTAGATGA 498 43.78 METNCSEFNLGDVLDVVTNQTMTLSREREVKIICESLADVSSLHLYGDNLRLQQVLSEFLTNTLLFTCKESSVIFKATPRKERIGKGIHIVHLELRITHPTPGIPAHLIQEMFDDNNDSSKEGLGLYISQKLVKIMNGTVQYLREAETSSFIILIEFPLVEHVAR* 166
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3757593 3758707 - Chy1G005280.1 Chy01g00528 217709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00528 165 ProSiteProfiles Histidine kinase domain profile. 1 161 IPR005467 -
Chy01g00528 165 PANTHER TWO-COMPONENT HISTIDINE KINASE 9 162 - -
Chy01g00528 165 SMART HKATPase_4 47 161 IPR003594 -
Chy01g00528 165 PANTHER PHYTOCHROME C 9 162 - -
Chy01g00528 165 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 47 153 IPR003594 -
Chy01g00528 165 Gene3D - 1 163 IPR036890 -
Chy01g00528 165 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 3 155 IPR036890 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00528 Chy-Chr1:3757593 Chy06g00756 Chy-Chr6:5211189 6.49E-35 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00528 - - csv:101211915 325.094