Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00548 ATGGGAGCTCATTCCCACGGCGGTCAAAAACCGGCTGATGTCGTCGCTAATTCTCACCACGAATTTCTCCAACCATTTCTCAAAAGTGGAGAAGAGTTTACAAATGATGTGATATTTTACTCATATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTAGCTGCTCAATTAGCCAAGCATCCGAGAGTGGTGTCGGTTTTTCTAAACAGAGGAAGAAAATTACACACAACAAGATCGTGGGAATTTATGGGATTAGAGAAGGAGAATGGAGTTATCAACTCAGAATCAATATGGAAGAAAGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGGCAGAATCAAAGAGCTTTAGTGATGATGAATATGGACCAATTCCTCATAGGTGGAAAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTATGCATCCGTCGTCGGCCCTCTCAATTCCTCATTCCATTCGCCGAGGGACAAAGAAGGCCATGGCTCTCATACCTTGTCCACGGCCGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTAGGTAAGGGCACTGCCAAGGGCGGATCACCTAGGGCTCGAGTGGCCGCTTACAAGGTCTGCTGGCCTCCGAAGGGTGGAAATGAGTGCTTTGATGCTGATATATTGGCAGGGTTTGATTTTGCGATTCACGATGGTGTCGATGTGTTGTCGGTGTCGCTTGGAGGAGATCCGAATCCGTTGTTTAACGATAGTGTAGCTATTGGCTCATTCCACGCCATCAAGCATGGGATTGTCGTGATTTGCTCTGCTGGAAATTCGGGACCGGCGGCCGGTACGGTGACCAATGTTGCGCCCTGGCAGATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTTGTTCTTGGGAACAGGAAGCAGATCGAGGGTGAAAGCCTGTCCCAGGATGCTTTGCCAAGCAAGAAGCTCTATCCACTCATGAATGCTGCAGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACACTTGACCCTATGAAAGCTAAGGGAAAGATCCTTGTCTGCCTTCGAGGTGATAATGCAAGAGTTGACAAAGGTGAACAAGCATTGTTGGCTGGTGCTGCGGGCATGATTCTTGCTAATAATGAGCTTAGTGGGAATGAAATCCTTGCTGACCCACATGTCCTTCCAGCCTCGCACATAAACTTCACCGACGGCAGTTTGGTCTTTGCATACATCAATTCAACTAAGTACCCCGAGGCTTACATCACACCAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTCATGGCAGCATTTTCATCGGTGGGACCAAACACTGTTACTCCAGAGATCCTGAAGCCTGATATTACAGCTCCTGGACTGAGTGTTATAGCTGCTTATAGTGAAGCAGAAGGACCTACGAACCAAGAATTTGATAATCGTCGGATTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAAGACTCTTTACCCGCATTGGAGTCCTGCAGCTATCAAATCTGCCATCATGACCACGGCAAGCACTTTAGACAACAACTTCGAGCCGCTCCTCAATGCGTCCTACTCAGTGGCCTCACCATTCAACTATGGAGCAGGACATGTTCATCCAAATGGTGCTACAGATCCAGGCTTGATCTATGACATAGAGGTTAATGAATATCTGTCATTTCTATGTGCATTAGGATATAACAAAGCTCAAATATCACAATTCTCCAATGGTCCCTTTAATTGCTCGGAGCCTATTAGTCCTACAAATCTTAACTACCCTTCAATAACTGTCCCTGAGCTCTCAAGATCAATCGCAATTACTCGAAGACTAAAGAATGTTGGTTCTCCTGGAACATACGAAGTCGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGAAGTTGAACTTCACAAGATTAGGAGAAGAGCTGAGCTTCAAAGTTTTTATGAAAGTCAAGGAACATAAAGTAGCAAAGAAGAATTATGTATATGGTGATTTGATATGGTCAGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAAGTAGTCTAG 2211 45.36 MGAHSHGGQKPADVVANSHHEFLQPFLKSGEEFTNDVIFYSYTRHINGFAAMLEDEVAAQLAKHPRVVSVFLNRGRKLHTTRSWEFMGLEKENGVINSESIWKKARFGEDTIIGNLDTGVWAESKSFSDDEYGPIPHRWKGICQNQNDPSFHCNRKLIGARYFNKGYASVVGPLNSSFHSPRDKEGHGSHTLSTAGGNFVAGASVFGLGKGTAKGGSPRARVAAYKVCWPPKGGNECFDADILAGFDFAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAIKHGIVVICSAGNSGPAAGTVTNVAPWQITVGASTMDRKFPSLVVLGNRKQIEGESLSQDALPSKKLYPLMNAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAAGMILANNELSGNEILADPHVLPASHINFTDGSLVFAYINSTKYPEAYITPATTQLGIRPAPFMAAFSSVGPNTVTPEILKPDITAPGLSVIAAYSEAEGPTNQEFDNRRIPFNSVSGTSMSCPHVSGIAGLLKTLYPHWSPAAIKSAIMTTASTLDNNFEPLLNASYSVASPFNYGAGHVHPNGATDPGLIYDIEVNEYLSFLCALGYNKAQISQFSNGPFNCSEPISPTNLNYPSITVPELSRSIAITRRLKNVGSPGTYEVEIRKPAGISVWVKPKKLNFTRLGEELSFKVFMKVKEHKVAKKNYVYGDLIWSDGKHHVRSPIVVKVV* 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3921594 3929677 + Chy1G005480.1 Chy01g00548 217729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00548 736 CDD PA_subtilisin_like 324 454 - -
Chy01g00548 736 Gene3D - 317 461 - -
Chy01g00548 736 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 1 735 - -
Chy01g00548 736 Pfam Subtilase family 108 562 IPR000209 GO:0006508|GO:0008236
Chy01g00548 736 Pfam PA domain 368 438 IPR003137 -
Chy01g00548 736 Pfam Peptidase inhibitor I9 11 79 IPR010259 -
Chy01g00548 736 PRINTS Subtilisin serine protease family (S8) signature 522 538 IPR015500 -
Chy01g00548 736 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Chy01g00548 736 PRINTS Subtilisin serine protease family (S8) signature 108 127 IPR015500 -
Chy01g00548 736 ProSiteProfiles Serine proteases, subtilase domain profile. 83 592 - -
Chy01g00548 736 Gene3D Peptidase S8/S53 domain 110 605 IPR036852 GO:0004252|GO:0006508
Chy01g00548 736 CDD Peptidases_S8_3 77 559 IPR034197 -
Chy01g00548 736 ProSitePatterns Serine proteases, subtilase family, serine active site. 523 533 IPR023828 -
Chy01g00548 736 SUPERFAMILY Subtilisin-like 78 596 IPR036852 GO:0004252|GO:0006508
Chy01g00548 736 SUPERFAMILY PA domain 376 463 IPR046450 -
Chy01g00548 736 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 79 IPR037045 -
Chy01g00548 736 Pfam Fibronectin type-III domain 637 733 IPR041469 -
Chy01g00548 736 PANTHER PEPTIDASE S8 1 735 - -
Chy01g00548 736 Gene3D - 609 736 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00548 Chy-Chr1:3921594 Chy06g01923 Chy-Chr6:23142590 0 dispersed
Chy02g00195 Chy-Chr2:1328642 Chy01g00548 Chy-Chr1:3921594 0 transposed
Chy12g00529 Chy-Chr12:7368197 Chy01g00548 Chy-Chr1:3921594 1.70E-70 transposed
Chy12g00718 Chy-Chr12:10762028 Chy01g00548 Chy-Chr1:3921594 1.71E-157 transposed
Chy01g00548 Chy-Chr1:3921594 Chy06g01917 Chy-Chr6:23103141 1.09E-07 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00548 - - csv:101212884 1453.73