Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00561 ATGGGTAATCCATCAAATAGGTACGAGGACAAAACGGAATGGGGGGAGCGAGTTGGATGGATTTACGGTTCAGTGACGGAGGATGTGGTCACAGGCTACCGTATGCACAACCGTGGATGGCACTCAGTTTACTGTATCACCAAACGTGACGCCTTTCGTGGGTCAGCTCCTATCAATCTCACCGATCGACTCCACCAAGTGCTCCGGTGGGCAACGGGTTCCGTCGAGATTTTCTTCTCGAGAAACAACGCCTTGTTAGCATCGAGACGCTTGAAACTTCTGCAACGACTCGCCTACCTTAACGTCGGCATCTATCCCTTCACGTCCATTTTCCTCATCGTCTACTGCTTCCTCCCGGCGCTGTCACTATTCTCCGGGCAGTTCATTGTCCAGACGCTCAATGTCACCTTCCTGATCTACCTTCTCATCATCACTGTTTGTTTAATCTCTTTAGCCATTTTGGAAGTCAAGTGGTCTGGCATCGGCTTGGAAGAGTGGTGGAGAAATGAACAATTTTGGCTCATTTCAGGCACATCTGCTCACTTGGCGGCCGTGGTTCAGGGTTTGTTGAAGGTGATAGCAGGGATTGAGATCTCTTTCACACTAACGTCGAAGTCGTCCGGGGACGACGTGGAAGACATATACGCGGATTTATACCTAGTGAAATGGACATCATTGATGGTTCCACCAATAGTGATAGCAATGATGAACATAATAGCAATGGCTGTGGCATTCTCAAGAACAATCTATAGCTCAGTGCCACAATGGAGCAAGTTCATAGGAGGAGCATTCTTTAGCTTTTGGGTGTTGGCACATTTATATCCTTTTGCAAAAGGGTTAATGGGAAGAAGAGGAAAAACACCAACAATTGTGATAGTATGGTCAGGTTTAATTGCAATTACACTATCTTTGTTGTGGATAGCAATTAACCCACCAAAACCAAGTGCTGAAGATGCTGCTGTTGGAGCAGGAGGAGGGTTTCAATTCCCTTAA 993 46.73 MGNPSNRYEDKTEWGERVGWIYGSVTEDVVTGYRMHNRGWHSVYCITKRDAFRGSAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRRLKLLQRLAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLIYLLIITVCLISLAILEVKWSGIGLEEWWRNEQFWLISGTSAHLAAVVQGLLKVIAGIEISFTLTSKSSGDDVEDIYADLYLVKWTSLMVPPIVIAMMNIIAMAVAFSRTIYSSVPQWSKFIGGAFFSFWVLAHLYPFAKGLMGRRGKTPTIVIVWSGLIAITLSLLWIAINPPKPSAEDAAVGAGGGFQFP* 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4021855 4022944 - Chy1G005610.1 Chy01g00561 217742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00561 330 Pfam Cellulose synthase 6 316 IPR005150 GO:0016020|GO:0016760|GO:0030244
Chy01g00561 330 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 322 - -
Chy01g00561 330 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D4 5 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00561 Chy-Chr1:4021855 Chy11g00501 Chy-Chr11:5396726 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00561 K20924 - csv:101217993 638.647