Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00582 ATGGAAGAGGTTGAAGGAAGAAGGGTTTGTCAGGAGTTTTCAGCTGGGTATTATGGTCTTTGTGCTGTTGGAGGAATGCTCAGTGCTGGGACTACTCATCTTGCTATTACACCTCTTGATGTCTTGAAGGTTAATATGCAGGTTAATCCAATCAAGTACAGTGGCATTTCTTCTGGTTTTTCTATTCTTTGGAGGGAACAAGGTCCTTCATCCCTTTGGAGGGGTTGGTCGGGCAAGTTATTTGGGTATGGAGTTCAAGGCGGCTTCAAATTCGGTCTCTATGAGTACTTTAAGAAGTTTTACTCTGATTTGCTGGAAGGCCACAGTAGAAGTTCCATATACTTTCTCAGCAGTGCTTCTGCTCAAGTTTTTGCCGACATTGCTCTCTGTCCTTTTGAGGCTGTCAAGGTCAGAGTCCAGGCACAACCCTATTATGCCAAGGGGTTGGCTGATGGGTTTCCAAAGTTATACTACAGTGAAGGTCTTTCGGGTTTCTACAGAGGCCTTTTTCCACTTTGGGGACGGAATCTGCCATTCTCCATGATAATGTTCTCAACATTTGAGCATTCAGTGAACTTCATATATCAGAATATCATTCAGCGCAGAAAGGAAGATTGCTCGAGAACCCAACAGCTTGGTGTTACATGTTTAGCTGGCTATACAGCTGGAGCTGTTGGTACTTTTGTCTCAAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAGAAGGCTGATAATGTGCTGCAGGCAGTGAAGAAGATAGGATTTGGAAATCTATTTATTAGAAGCCTTCCTGTCAGAATTACAATTGTTGGTCCTCTTGTTACTTTGCAGTGGTTCTTCTATGACACCATTAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGATCAACAACAAAAAATTGGAAGAAGCAAAACTATCAACTTAG 933 42.34 MEEVEGRRVCQEFSAGYYGLCAVGGMLSAGTTHLAITPLDVLKVNMQVNPIKYSGISSGFSILWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKFYSDLLEGHSRSSIYFLSSASAQVFADIALCPFEAVKVRVQAQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMIMFSTFEHSVNFIYQNIIQRRKEDCSRTQQLGVTCLAGYTAGAVGTFVSNPADNIVSSLYNKKADNVLQAVKKIGFGNLFIRSLPVRITIVGPLVTLQWFFYDTIKVLSGLPTSGGINNKKLEEAKLST* 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4159269 4164438 + Chy1G005820.1 Chy01g00582 217763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00582 310 Pfam Mitochondrial carrier protein 23 102 IPR018108 -
Chy01g00582 310 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Chy01g00582 310 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 5 304 IPR044677 GO:0005315|GO:1990547
Chy01g00582 310 Gene3D Mitochondrial carrier domain 21 289 IPR023395 -
Chy01g00582 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Chy01g00582 310 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 5 304 - -
Chy01g00582 310 SUPERFAMILY Mitochondrial carrier 20 285 IPR023395 -
Chy01g00582 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Chy01g00582 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 289 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00582 Chy-Chr1:4159269 Chy06g01467 Chy-Chr6:15896176 4.67E-107 dispersed
Chy01g00582 Chy-Chr1:4159269 Chy08g00704 Chy-Chr8:14891198 1.08E-13 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00582 K15102 - csv:101219895 625.935