Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00582 | ATGGAAGAGGTTGAAGGAAGAAGGGTTTGTCAGGAGTTTTCAGCTGGGTATTATGGTCTTTGTGCTGTTGGAGGAATGCTCAGTGCTGGGACTACTCATCTTGCTATTACACCTCTTGATGTCTTGAAGGTTAATATGCAGGTTAATCCAATCAAGTACAGTGGCATTTCTTCTGGTTTTTCTATTCTTTGGAGGGAACAAGGTCCTTCATCCCTTTGGAGGGGTTGGTCGGGCAAGTTATTTGGGTATGGAGTTCAAGGCGGCTTCAAATTCGGTCTCTATGAGTACTTTAAGAAGTTTTACTCTGATTTGCTGGAAGGCCACAGTAGAAGTTCCATATACTTTCTCAGCAGTGCTTCTGCTCAAGTTTTTGCCGACATTGCTCTCTGTCCTTTTGAGGCTGTCAAGGTCAGAGTCCAGGCACAACCCTATTATGCCAAGGGGTTGGCTGATGGGTTTCCAAAGTTATACTACAGTGAAGGTCTTTCGGGTTTCTACAGAGGCCTTTTTCCACTTTGGGGACGGAATCTGCCATTCTCCATGATAATGTTCTCAACATTTGAGCATTCAGTGAACTTCATATATCAGAATATCATTCAGCGCAGAAAGGAAGATTGCTCGAGAACCCAACAGCTTGGTGTTACATGTTTAGCTGGCTATACAGCTGGAGCTGTTGGTACTTTTGTCTCAAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAGAAGGCTGATAATGTGCTGCAGGCAGTGAAGAAGATAGGATTTGGAAATCTATTTATTAGAAGCCTTCCTGTCAGAATTACAATTGTTGGTCCTCTTGTTACTTTGCAGTGGTTCTTCTATGACACCATTAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGATCAACAACAAAAAATTGGAAGAAGCAAAACTATCAACTTAG | 933 | 42.34 | MEEVEGRRVCQEFSAGYYGLCAVGGMLSAGTTHLAITPLDVLKVNMQVNPIKYSGISSGFSILWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKFYSDLLEGHSRSSIYFLSSASAQVFADIALCPFEAVKVRVQAQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMIMFSTFEHSVNFIYQNIIQRRKEDCSRTQQLGVTCLAGYTAGAVGTFVSNPADNIVSSLYNKKADNVLQAVKKIGFGNLFIRSLPVRITIVGPLVTLQWFFYDTIKVLSGLPTSGGINNKKLEEAKLST* | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4159269 | 4164438 | + | Chy1G005820.1 | Chy01g00582 | 217763 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00582 | 310 | Pfam | Mitochondrial carrier protein | 23 | 102 | IPR018108 | - | |
Chy01g00582 | 310 | Pfam | Mitochondrial carrier protein | 114 | 196 | IPR018108 | - | |
Chy01g00582 | 310 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 5 | 304 | IPR044677 | GO:0005315|GO:1990547 | |
Chy01g00582 | 310 | Gene3D | Mitochondrial carrier domain | 21 | 289 | IPR023395 | - | |
Chy01g00582 | 310 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 16 | 100 | IPR018108 | - | |
Chy01g00582 | 310 | PANTHER | MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL | 5 | 304 | - | - | |
Chy01g00582 | 310 | SUPERFAMILY | Mitochondrial carrier | 20 | 285 | IPR023395 | - | |
Chy01g00582 | 310 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 109 | 193 | IPR018108 | - | |
Chy01g00582 | 310 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 210 | 289 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00582 | Chy-Chr1:4159269 | Chy06g01467 | Chy-Chr6:15896176 | 4.67E-107 | dispersed | |
Chy01g00582 | Chy-Chr1:4159269 | Chy08g00704 | Chy-Chr8:14891198 | 1.08E-13 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00582 | K15102 | - | csv:101219895 | 625.935 |