Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00586 ATGTTGTACTTTGCTGATCCGTTTCGGTCAAAGGAGTCGAGTTTGGGCTTGATGTTTATGAATATGGTTTGGCTTCTTTTAGTACTTTTTTGTGTTCAAGGAATAATTTCAGAAGGGAGTTCAAGAAATGAAGTAGTGAAAGTTGGAGCTATATTTTCACTTAGTTCTGTGAATGGGAAAGTTTCTAAGATTGCCATTGAAGCTGCTGAGAAAGATGTGAATTCTGATCCAAGTGTTCTTGGTGGAAGAAAGCTATCTATTTCAATCCATGATGCAAATTATAGTGGATTTCTTGGTATCACAGGAGCAATGAAGTACATGGTATCTGACACAGTTGCAATCCTTGGTCCAGAAGATTCTACAATGGCTCATATTCTTTCCCATCTTTCTAATGAACTCCATATCCCATTACTCTCATTTACAGCATTGGATCCAACACTTTCATCATTGCAATATCCATACTTCATTCAAACAGCTCCAAATGATCAGTTCCAAATGACTGCAATTGCTGATATAATTCATTATTACGATTGGCATGACGTCGTTGTAGTTTTCACCGACGACGATCAATGTCGAAACGGTATGATTGCATTAGGTGATAAACTTGAAGAGAGAAGCTTGAAAATTTCCTCTAAAGTCCCACTTCCTCCTTACCCAACAGCAACAAGAACTCAAGTTCAAGATGCACTGGTAAAGATCAAAATGATGGAATCTCGAGTAATTGTATTGTACGCTTTTTCGAAAACCGGTTTCTTGGTTTTCGAAGTGGCTCAAAGCCTTAAAATGATGGAACCTGGTTATGTGTGGATAACCTCTAGTTGGCTATCAACAGAAATAGATTCTACTTCATCACTTCCTTTGAACATTCCCAACTCTATCCAAGGGGTTCTTACTCTTCGTCTACACACGCCAGATTCAAAAAGTAAGCAATCTTTTATATCGAGATGGAACGAGTTGAGTAACACCTCGTCAATTAGGTTGAATACATATGGCTTATATGCTTATGATACTGTTTGGATGATTGCAAGAGGAGTGAAGAAGTTATTGGATCGAAATGGGACTATCTCATTCTCTAAAGACACAAAAAATGCTGGTATTCTTAATGGAGAGACCTTGGATTTTAGTTCACTAAGAATCTTTAATGAAGGACATGATTTGCTTAACAATTTATTGAATACAAGTATGATGGGTTTAACAGGGCCTATTCAGTTTCAAGATAAATCCCCTGTCCGTCCTTCATATGATATCTTAAATGTTGTGAAATCTGGTATGAAGAGAATTGGATATTGGTCCAACTATTCTGGTTTATCTGTTGTGGCACCTGAAACGTTGTATCGAAAATCAATTAACCGTTCTATGTCAACCGATCAGTTAAATAGCACAATGTGGCCTGGGGGATTGACAACAAAACCTCGGGGTTGGGTTCTTCCACTAGATGGAAGACGTTTACGAATTGGCGTTCCACGAAGAGTTAGTTATCAGGAGTTCGTGATGCCGGGAAATGGTACTGGAACAATCAAAGGATATTGTATTGATGTCTTTACTGCTGCTATCAATTTGCTTCCATATGCAGTTAAATATGAGTTCGTTTTGTTTGGAGATGGTGAGGAGAATCCTAGCTATCTTGAGCTTGTAAATAAGGTTGAACAGAAAGAATTTGATGCTGCTGTTGGTGATATTGCAATTGTGACCAGTCGGACGAAGATGGTCGATTTTACACAGCCCTACATCGACTCAGGGCTTGTAGTTTTGACCCCTATGAAGAAGGTGAATTCAAGTCCTTTGGCATTCCTTCGCCCATTCTCACCAATGATGTGGGCTGTCACAGCAGCATTTTTCTTCCTCATTGGATTAGTTGTGTGGATATTAGAACATCGAAAAAACGACGAATTTCGAGGACATCCAAGAACGCAAATTGTCACGATTCTTTGGTTTGGCTTCTCAACTATGTTTTTTGCACAAAGAGAAAATGTGGTGAGCACGCTCGGCCGTTTCGTGATTGTCGTATGGCTTTTTGTGGTTCTAATTATCACCTCCAGCTACACCGCTAACCTCACATCCATATTCACAGTACAACTAGCCACCTCCCCTATCACAGGAATTGATTCGTTGATATCTAGCAATGTTCATATAGGATTCCAAGTTGGTTCGTTTGCTGAAACTTATTTAAGCGAGCAACTTAATGTCCAAAAATCTAGGCTCATTGCTCTTGGATCCCCGGAAGAGTATGCGGCAGCTCTCAAGAACGGAACGGTCGGCGCCATCGTCGATGAGCAGCCATACATCGATCTCTTTCTCACCGAGTATTGCGATTACTCAATACAGGGCCAACAGTTCACCAAAAGTGGATGGGGATTCGCATTTCCACGAGACTCTCCATTGGCGGTTGATTTATCGACGGCCATACTCACTCTATCGGAGAATGGACGTCTTCAAAAGATTCACAGCAGGTGGTTCTCAAGAAAATCTTGCAGTTCAGGAGATTCCGATTCCGAACAACTTCACTTGCAAAGCTTCATTGGATTGTTCTCCATTTGTGCCGGTGTCTGTTTATTCGCTCTTTTGCTCCATTTTCTCACCACAATGTGTCAATTCAACCGCCATTTGAAGAAAGATCCAGAAGCTTCAACCACCAGCGCCGACGCGGGTGCCGGTGCTACGCCGCTCCGAAAATTCTTGAAGTTTGCAGATAAGAAGAAGGAAAGAAGGACGAGCTATTCGAAGAGGAAGGTCGAAGATGCAATGTCGAGTGAACATGTAGAGGATTAG 2769 40.95 MLYFADPFRSKESSLGLMFMNMVWLLLVLFCVQGIISEGSSRNEVVKVGAIFSLSSVNGKVSKIAIEAAEKDVNSDPSVLGGRKLSISIHDANYSGFLGITGAMKYMVSDTVAILGPEDSTMAHILSHLSNELHIPLLSFTALDPTLSSLQYPYFIQTAPNDQFQMTAIADIIHYYDWHDVVVVFTDDDQCRNGMIALGDKLEERSLKISSKVPLPPYPTATRTQVQDALVKIKMMESRVIVLYAFSKTGFLVFEVAQSLKMMEPGYVWITSSWLSTEIDSTSSLPLNIPNSIQGVLTLRLHTPDSKSKQSFISRWNELSNTSSIRLNTYGLYAYDTVWMIARGVKKLLDRNGTISFSKDTKNAGILNGETLDFSSLRIFNEGHDLLNNLLNTSMMGLTGPIQFQDKSPVRPSYDILNVVKSGMKRIGYWSNYSGLSVVAPETLYRKSINRSMSTDQLNSTMWPGGLTTKPRGWVLPLDGRRLRIGVPRRVSYQEFVMPGNGTGTIKGYCIDVFTAAINLLPYAVKYEFVLFGDGEENPSYLELVNKVEQKEFDAAVGDIAIVTSRTKMVDFTQPYIDSGLVVLTPMKKVNSSPLAFLRPFSPMMWAVTAAFFFLIGLVVWILEHRKNDEFRGHPRTQIVTILWFGFSTMFFAQRENVVSTLGRFVIVVWLFVVLIITSSYTANLTSIFTVQLATSPITGIDSLISSNVHIGFQVGSFAETYLSEQLNVQKSRLIALGSPEEYAAALKNGTVGAIVDEQPYIDLFLTEYCDYSIQGQQFTKSGWGFAFPRDSPLAVDLSTAILTLSENGRLQKIHSRWFSRKSCSSGDSDSEQLHLQSFIGLFSICAGVCLFALLLHFLTTMCQFNRHLKKDPEASTTSADAGAGATPLRKFLKFADKKKERRTSYSKRKVEDAMSSEHVED* 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4180344 4185748 - Chy1G005860.1 Chy01g00586 217767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00586 922 Pfam Receptor family ligand binding region 64 421 IPR001828 -
Chy01g00586 922 Gene3D - 594 735 - -
Chy01g00586 922 SUPERFAMILY Periplasmic binding protein-like I 40 474 IPR028082 -
Chy01g00586 922 PIRSF IGluLR_plant 17 921 IPR017103 -
Chy01g00586 922 Gene3D - 64 411 - -
Chy01g00586 922 PANTHER GLUTAMATE RECEPTOR 3.3 30 913 - -
Chy01g00586 922 Pfam Bacterial extracellular solute-binding proteins, family 3 493 820 IPR001638 -
Chy01g00586 922 CDD GluR_Plant 481 819 - -
Chy01g00586 922 SUPERFAMILY Periplasmic binding protein-like II 461 821 - -
Chy01g00586 922 SMART GluR_14 484 821 IPR001320 GO:0015276|GO:0016020
Chy01g00586 922 Gene3D - 161 436 - -
Chy01g00586 922 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 913 - -
Chy01g00586 922 Gene3D - 745 826 - -
Chy01g00586 922 Pfam Ligand-gated ion channel 821 849 IPR001320 GO:0015276|GO:0016020
Chy01g00586 922 Gene3D - 477 593 - -
Chy01g00586 922 MobiDBLite consensus disorder prediction 898 922 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00586 Chy-Chr1:4180344 Chy02g00503 Chy-Chr2:3072710 0 dispersed
Chy01g00586 Chy-Chr1:4180344 Chy07g00408 Chy-Chr7:3234623 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00586 K05387 - csv:101208602 1757.65