Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00633 ATGCCTTTCTTCCTCCTCCTTCTCTTCCTCTCCCTTTTCTCCTCAGCCACTGCTTGTGATCGTTGTATTCATCAAGCCAAAGCCGCCTTCTACCAAGACGAAGCCGCCGGTCTATATAGAGGCGCTTGTGGCTATGGCGATCTTACATTACAGCTCTCAAATGGCTACTTCTCCGCCATTATGCCTCCTCTTTACAAGTATGGCGCTGGCTGTGGCGCTTGTTTTCAAGTAAGGTGCAAGAACGAGAAGATTTGTAGTAAAGAAGGGACGAAAATAATTGTAACAGATCGAAACGATAATACTTACACAGGATTGGTTCTTAGTCAGAAAGCTTTTGGTGAAATGGCTGTAAGTGGAAAGGATGGATTGCTTTTGAGTTATGGAGTTGTGGATGTTGAATTCAAGAGGATTCCTTGTGAATACAATAACAAAAACTTGATGGTTAGAGTAGAAGAATGGAGTCAATATCCCAATTACTTAGCTATTAAATTGCTTAACCAAGGTGGCCAAACCGAAATAGTAGCCATCGATATAGCTCAGGTTGGTTACTCGAATTGGGATTACATGGGTAGGAACTACGGTGCTGTGTGGGAGACTAAAAAACCAGCCCCAAAAGGACCATTGCAACTACGGTTCGTGGTTACTTCTGGATATGATGGGAAATACATTTGGGCTAAATACGTACTTCCTGCTGACTGGAGACCTGGACTAGTTTACGATACTGGAGTTCAAATCTACGACATTGCTAAAGAAGGTTGTCCAACAGAACAATGCGGCGATGGGCAATGGAAACGACGATAA 801 43.32 MPFFLLLLFLSLFSSATACDRCIHQAKAAFYQDEAAGLYRGACGYGDLTLQLSNGYFSAIMPPLYKYGAGCGACFQVRCKNEKICSKEGTKIIVTDRNDNTYTGLVLSQKAFGEMAVSGKDGLLLSYGVVDVEFKRIPCEYNNKNLMVRVEEWSQYPNYLAIKLLNQGGQTEIVAIDIAQVGYSNWDYMGRNYGAVWETKKPAPKGPLQLRFVVTSGYDGKYIWAKYVLPADWRPGLVYDTGVQIYDIAKEGCPTEQCGDGQWKRR* 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4451217 4452486 - Chy1G006330.1 Chy01g00633 217814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00633 266 SUPERFAMILY Barwin-like endoglucanases 8 143 IPR036908 -
Chy01g00633 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 40 144 IPR007112 -
Chy01g00633 266 PANTHER EXPANSIN-B3 5 260 - -
Chy01g00633 266 Pfam Lytic transglycolase 60 133 IPR009009 -
Chy01g00633 266 Pfam Expansin C-terminal domain 148 230 IPR007117 -
Chy01g00633 266 SUPERFAMILY PHL pollen allergen 144 240 IPR036749 -
Chy01g00633 266 Gene3D - 141 246 IPR036749 -
Chy01g00633 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 241 IPR007117 -
Chy01g00633 266 PANTHER EXPANSIN-LIKE A1-RELATED 5 260 - -
Chy01g00633 266 Gene3D - 11 140 IPR036908 -
Chy01g00633 266 PRINTS Expansin/Lol pI family signature 227 241 IPR007118 GO:0005576
Chy01g00633 266 PRINTS Expansin/Lol pI family signature 61 79 IPR007118 GO:0005576
Chy01g00633 266 PRINTS Expansin/Lol pI family signature 186 200 IPR007118 GO:0005576
Chy01g00633 266 PRINTS Expansin/Lol pI family signature 127 143 IPR007118 GO:0005576
Chy01g00633 266 PRINTS Expansin/Lol pI family signature 39 57 IPR007118 GO:0005576
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00633 Chy-Chr1:4451217 Chy01g00635 Chy-Chr1:4477152 1.12E-107 dispersed
Chy01g00633 Chy-Chr1:4451217 Chy01g00634 Chy-Chr1:4458410 4.46E-78 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00633 - - csv:101217243 544.658