Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00653 ATGGTTATGGAGGATAACGAGAGCTGTGGAAGTAGAGCGTACGACTTGTTATCGCCGGCGCAAAGTCGGCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTCTACGGCGTTTGAAGGATTCCAACAACGAGGAGGCTATTCAGCCTGGTTTTGATGACGAACTATGGGTTCACTTCAATCGTCTTCCCACTCGATATGCTCTAGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTCGCTCACGATCCTGCAAATCGACCTGCAATTGAAGTCCGCCTTGTGCAGGTCCAAGCCGTTTCTGATGAGCATTCAGCTGACTTTGCTGATTCATGTCCTGTAAAAGACACTGATCATAATTCTGCAAATTGCTTGGGCAGACAGAGCATGCATCCACCACCTGCATTTGGGTCATCTCCTAACCTCGAGGCCTTGGCTCTTGAAGCTAATAATACTCAGGATCTGGAGGTTGATCAGTCTGTACATGCCAGAACACAGTTTTTCCGGCCAATGCATGAAATCACCTTCTCTGCGGATGATAAGCCGAAACTTCTTAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTCAACATCCAGGAGGCACATGCATTTTCCACTGTTGATGGTTACTCATTGGATGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGGCTGAAGACTGCATTAGAGAATGAAGTTTTACTGGTTGAGAGGCGAGGTTGGCCACATCAGAAATCCTCGTCTCCTGTGGGGGAACTTGATATAACTCCTAAATGTGAGCCTGATCGGGTAGAAATACCCACAGATGGGACTGACGTATGGGAAATTAATCCTAGACATTTGAAGTTTGAGCATAAAGTTGCATCTGGTTCATATGGGGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAGTTCTCAAAACTGAACGTGTAAATACAGATATGCAAAGTGAGTTTGCCCAGGAGGTATATATTATGAGAAAAGTAAGACACAAGAATGTCGTACAGTTTATAGGTGCATGTACTAAGCCCCCAAGCTTGTGCATTGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGGACTTTTAGGCTTCCATCTTTGCTTAAGGTAGCTATTGATGTCTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGAGATCTAAAAGCTGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCCGAGTAAAAGCTCAATCAGGAGTTATGACCGCAGAAACTGGGACATATCGTTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTTGGAATTGTCTTGTGGGAGCTGCTAACTGGAAAGCTACCTTATGAATTCCTAACACCATTACAAGCCGCAGTCGGAGTAGTACAAAAGGGTTTACGGCCTACTATTCCTAAGCACACTAATCCCAAGCTAGCTGACTTGCTAGAAAAATGTTGGCAGCAAGACCCATCTTGCAGGCCTGACTTTTGTGAAATTATCGATATATTGTTGCAGATAACTAAGGAAGTTGCTGAAGAGGGTGAGGATCGAAGAAAGGAGAAAAGCTGGCTTATTTTACAAGTGAATGTGCCTAATTTCAATGCAGGACAAAACAATTTCGTTTTGGACGAGCTTTTTCTTAGACCCAATGTAAAGTGA 1776 43.24 MVMEDNESCGSRAYDLLSPAQSRQQRQKFEVYNEVLRRLKDSNNEEAIQPGFDDELWVHFNRLPTRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAVSDEHSADFADSCPVKDTDHNSANCLGRQSMHPPPAFGSSPNLEALALEANNTQDLEVDQSVHARTQFFRPMHEITFSADDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTALENEVLLVERRGWPHQKSSSPVGELDITPKCEPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKTERVNTDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLADLLEKCWQQDPSCRPDFCEIIDILLQITKEVAEEGEDRRKEKSWLILQVNVPNFNAGQNNFVLDELFLRPNVK* 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4649398 4659122 + Chy1G006530.1 Chy01g00653 217834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00653 591 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 20 556 - -
Chy01g00653 591 CDD ACT_TyrKc 179 246 - -
Chy01g00653 591 Gene3D Phosphorylase Kinase; domain 1 283 371 - -
Chy01g00653 591 SUPERFAMILY ACT-like 179 243 IPR045865 -
Chy01g00653 591 CDD STKc_MAP3K-like 299 542 - -
Chy01g00653 591 ProSiteProfiles Protein kinase domain profile. 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00653 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Chy01g00653 591 ProSiteProfiles ACT domain profile. 181 253 IPR002912 -
Chy01g00653 591 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 556 - -
Chy01g00653 591 SUPERFAMILY Protein kinase-like (PK-like) 277 542 IPR011009 -
Chy01g00653 591 Coils Coil 231 251 - -
Chy01g00653 591 Gene3D Transferase(Phosphotransferase) domain 1 372 578 - -
Chy01g00653 591 Pfam Protein tyrosine and serine/threonine kinase 293 541 IPR001245 GO:0004672|GO:0006468
Chy01g00653 591 SMART serkin_6 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00653 591 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672|GO:0006468
Chy01g00653 591 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672|GO:0006468
Chy01g00653 591 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672|GO:0006468
Chy01g00653 591 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672|GO:0006468
Chy01g00653 591 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00653 Chy-Chr1:4649398 Chy06g02262 Chy-Chr6:26614440 0 dispersed
Chy11g01377 Chy-Chr11:20090311 Chy01g00653 Chy-Chr1:4649398 3.20E-47 dispersed
Chy12g01404 Chy-Chr12:18151135 Chy01g00653 Chy-Chr1:4649398 1.43E-64 dispersed
Chy01g00653 Chy-Chr1:4649398 Chy12g01272 Chy-Chr12:17302183 4.51E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70980 PF07714 PK_Tyr_Ser-Thr 3.90E-74 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00653 - - csv:101213048 1124.38