Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00654 | ATGGATACGCTCAAGAAATCTTTCAAAGGCAATGTATCTTTCAAGCATACAAGGAAAATTTCTGCTGGAGGAGCCGGCAGCGAAATCAATCACGAAGAGCTCCCCATTCTTCTCAATCACCAAACTACGGATCATAGTCGTTGTCTAAGGGATCCTCATCCGGTGAACGATTCTGATACGTCTGACAGAACAGAGGTCATTCTCAAGATTGATGGTGGTGGTTCTTCAGCTGTCTCCAGATCTCTGGACTCTGCTGACAATAATGGCGGGAAGGTTTGGCGGGAATCCAGGTACGATTTCTGGAACAATGATGAAATTGGAATTGGGGAGAGTGAGAGAATGGGTGATAATAGTGGTGTTGATAGAAACGAGGGATTTGAATTTGTACAGACTGGTTATGGAATGGAGGATCCTCCTACGAAGCTGATTGGTGACTTTCTTCGTAAGCAGAAAATTGAGGGACAAACGACTTTGGATATGGATTTGGAAATGGAGGAATTGAAGCCAAATAGGATTATAATTCCATTGGCAGAGTCGCCTTTGAGTCAAACTTCTAAGGATCTTAAAGTTTCGTTTCAGCAGGATTCGACAGAAATTTCGAGCAATGATCAGTCAATGAGAAGGCGGAATAGAGATTCTAATGATTTGAAAGAAGAGTCTAAAGGAGGACAATCGCCATGGCAACAACCGCACCATGAACGTCTTGGATCTCCAACTATCGCTGGGGTTCAGAACGAATCTCTTGCTGAGGCTATGAGATGCGCATCTAACTTGTCCTTTCATAGTGAGCTTTCATTTCAAAGGAAATCTAATTTACTGAGGACGAAAACCAAGTCAAGATTGATAGACCCACCTGCCGAGCCTGACCGGCTCTCTGGCCTCATTCCTAAGTCAGGTCAACTACGATCTGGGTTTCTGGGGAAGATTGAAGACGACGACGATGACCCCTTTCTAGAGGATGACCTTCCAGACGATTTTAAAAGGGGAAATTTCAGTGCTCTAACTGTTCTACAATGGGTTAGTTTGATTATAATCACTGCAGCTTTAATCTGCACTCTTTCTGTTCCTTATTTGAGGGAAAAGAGTCTATGGGAGTTGGATATATGGAAATGGGAGGTGATGATTATGATACTGATTTGTGGACGATTGGTATCTGGTTGGGGGATTAGGATTGGTGTATTTTTCATTGAGAGGAATTTTCTTTTGCGTAAAAGGGTTTTGTATTTTGTATATGGGGTTAGAAAACCAGTGCAGAATTGTTTATGGTTAGGCCTTGTTCTCATCGCTTGGCATTTGTTGTTCAATAAACGGGTTGAGAAACAAACCAACACCAGTATACTCAATTATGTGAGCAGAGTTTTAGTTTGTCTCTTGATAAGCACACTGATATGGCTTGTGAAAACCTTGATGGTGAAGGTGCTTGCCTCTTCTTTCCATGTAAGCACATACTTCGATCGAATTCAGGAATCGTTGTTTAATCAATATGTCATTGAGACGCTCTCGGGTCCACCTCTGGTTGAAATACGGAAGAATGAGGAAGAAGAGGAGAGGATTGCAGATGAAGTCCAAAAGTTACAGAATGCAGGAATTACCATACCCCCTGATCTCAAGGCTGCAACCTTTGCTTCTATAAAGAGTGGAAGGGCAATAGGTAGTGGACGGACCCACAAAAGTTTTTGTGCAAAAAGTTGCAAACTCTCTCGAGCACTGACCAAAAATGGGAACGATGGAATAACGATTGACCATTTGCACAAACTAAGTACGAAGAACGTCTCTGCCTGGAATATGAAGAGGTTGTTGAACATAGTTCGATATGGTAGTATTTCCACACTGGATGAACAAATACGGGGGCCGTGTCTTGATGATGAATCTACTACAGAGATCAAAAGTGAACGCGAGGCAAAGGCTGCAGCAAAAAAGATTTTTCAGAATGTGGCTCGTCGTGGATATAAGTACATCTACCTGGATGACTTAGTGCGGTTCATGAGAGAAGACGAGGTTCTTAAAACGATGAGTCTCTTTGAAGGAGCCGCTGAAAACCAGAGGATAAGCAAATCTGCCTTGAAAAATTGGGTGGTCAATGCGTTCAGGGAACGGAGAGCCCTTGCTTTAACACTGAATGATACCAAAACAGCTGTGGATAAACTACATCACATGGTGAATGTCATATTCGGCATCCTTATATTAATTTTATGGCTTATAGTATTAGGAATTGCCTCCAGCAAATTTTTCATCTTCCTTAGTTCTCAAATAGTGGTTGTGGCATTTATTTTTGGAAACACTTGCAAAACCATATTTGAAGCAATCATCTTTTTGTTTGTCATGCATCCATTTGACGTTGGAGATCGCTGCGAAATCGATGGAATGCAGATGGTTGTAGAGGAAATGAACATCTTGACTACTGTATTCTTGAGATACGACAACTTGAAGGTTATAATCCCAAATAGTGTTCTTGCAACCAAATTAATCCACAACTTCTACCGTAGTCCTGACATGGGCGAATCGGTTGAATTCCTTGTCCATATCGCTACACCAGCTGAGAAAATTACGGTCATGAAACAGAGAATTATAAGTTACATTGAAGGCAACAAAGAACATTGGTATCCTGCTCCTATGATTGTGTTCAAGGATATAGATGGTTTAAACAAGGTCAAATTGGCAGTTTGGTTGTCACACAGAATGAACCATCAAGACTCAGGGGAAAGATGGGCTCGGAGGTCCGTCTTGGTCGAAGAAGTTGTTAAAGTCTGTCAAGAGCTCGACATTCAATATCGTCTATTGCCAATTGATATCAATATCCGTTCATTGCCTTCTTCTGCACCCTCCATTGGCTTTCCTTCAAATTGGACTTCCCCTGCAAGTTGA | 2865 | 41.85 | MDTLKKSFKGNVSFKHTRKISAGGAGSEINHEELPILLNHQTTDHSRCLRDPHPVNDSDTSDRTEVILKIDGGGSSAVSRSLDSADNNGGKVWRESRYDFWNNDEIGIGESERMGDNSGVDRNEGFEFVQTGYGMEDPPTKLIGDFLRKQKIEGQTTLDMDLEMEELKPNRIIIPLAESPLSQTSKDLKVSFQQDSTEISSNDQSMRRRNRDSNDLKEESKGGQSPWQQPHHERLGSPTIAGVQNESLAEAMRCASNLSFHSELSFQRKSNLLRTKTKSRLIDPPAEPDRLSGLIPKSGQLRSGFLGKIEDDDDDPFLEDDLPDDFKRGNFSALTVLQWVSLIIITAALICTLSVPYLREKSLWELDIWKWEVMIMILICGRLVSGWGIRIGVFFIERNFLLRKRVLYFVYGVRKPVQNCLWLGLVLIAWHLLFNKRVEKQTNTSILNYVSRVLVCLLISTLIWLVKTLMVKVLASSFHVSTYFDRIQESLFNQYVIETLSGPPLVEIRKNEEEEERIADEVQKLQNAGITIPPDLKAATFASIKSGRAIGSGRTHKSFCAKSCKLSRALTKNGNDGITIDHLHKLSTKNVSAWNMKRLLNIVRYGSISTLDEQIRGPCLDDESTTEIKSEREAKAAAKKIFQNVARRGYKYIYLDDLVRFMREDEVLKTMSLFEGAAENQRISKSALKNWVVNAFRERRALALTLNDTKTAVDKLHHMVNVIFGILILILWLIVLGIASSKFFIFLSSQIVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGMQMVVEEMNILTTVFLRYDNLKVIIPNSVLATKLIHNFYRSPDMGESVEFLVHIATPAEKITVMKQRIISYIEGNKEHWYPAPMIVFKDIDGLNKVKLAVWLSHRMNHQDSGERWARRSVLVEEVVKVCQELDIQYRLLPIDINIRSLPSSAPSIGFPSNWTSPAS* | 955 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4659404 | 4663315 | + | Chy1G006540.1 | Chy01g00654 | 217835 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00654 | 954 | MobiDBLite | consensus disorder prediction | 185 | 201 | - | - | |
Chy01g00654 | 954 | Coils | Coil | 508 | 528 | - | - | |
Chy01g00654 | 954 | SUPERFAMILY | Sm-like ribonucleoproteins | 767 | 826 | IPR010920 | - | |
Chy01g00654 | 954 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 116 | 938 | - | - | |
Chy01g00654 | 954 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN | 3 | 106 | - | - | |
Chy01g00654 | 954 | PIRSF | Memb_At2g17000 | 51 | 954 | IPR016688 | - | |
Chy01g00654 | 954 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 116 | 938 | IPR016688 | - | |
Chy01g00654 | 954 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 3 | 106 | IPR016688 | - | |
Chy01g00654 | 954 | MobiDBLite | consensus disorder prediction | 202 | 219 | - | - | |
Chy01g00654 | 954 | Pfam | Mechanosensitive ion channel | 719 | 923 | IPR006685 | GO:0016020|GO:0055085 | |
Chy01g00654 | 954 | MobiDBLite | consensus disorder prediction | 185 | 237 | - | - | |
Chy01g00654 | 954 | Gene3D | - | 777 | 826 | IPR023408 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00654 | Chy-Chr1:4659404 | Chy11g01095 | Chy-Chr11:15977556 | 0 | dispersed | |
Chy01g00654 | Chy-Chr1:4659404 | Chy02g01258 | Chy-Chr2:9193429 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00654 | K22048 | - | csv:101207426 | 1792.32 |