Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00665 ATGAACTTTTTGAGGGCCTGTTTCCAGTCGAGCTCCGATCGGTATGGGGCGGGGGAAATCAGGGGGCGGCAAGAAGGGTTGCTATGGTACAAAGATAGTGGACAACACTTGAATGGAGAGTTTTCAATGTCTGTGATTCAGGCTAACAATTTGCTTGAAGATCAAAGCCAGATTGAGTCAGGCAGTTTGAGCTTACAAGAGTCTGGCCCCAGAGGAACATTTGTTGGTGTATATGATGGCCATGGAGGCCCTGAGACTTCTCGGTATATCTGTGATCATCTTTTCCAGCATCTCAAGAGATTTACTTCTGAGCAAGATTTAATGTCTGCGGATGTAATTCGCAAGGCGTTCCAAGCGACGGAAGAGGGTTTTCTTTCAATAGTTCGAAGTCAATGGCCAATAAATCCTCAAATTGCAGCTGTGGGTTCATGCTGTCTAGTTGGTGTAATTTGTGATGGGACTCTCTATGTTGCAAATCTAGGCGATTCACGTGCGGTTTTGGGTAGAGCAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTATCAACAGAGCACAATGTTTCTAATGAGTCAGTGAGGCAGGAGCTGCAGTCTTTGCATCCTGATGACCCACAAGTTGTGGTTTTAAGGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATCTCCAGATCTATAGGTGACGTGTACTTGAAAAAAGCTGAGTTCAATAAAGAACCATTGTATGGAAAGTTTCGAGTTCAGGAACCTTTCAGAACGCCATTTTTGAGCGCTGAACCAGCCATTTCTGAGATCCAGTTGAAACCAGATGATCAATTTGTTATATTTGCATCAGATGGTTTGTGGGAGCACCTTAGCAATCAGGAAGCGGTTGATATAGTTCATAGCCACAAACAAAGTGGAAGTGCAAAAAGACTGGTCAGAGCTGCACTTCAAGTAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATCGGCCGTGGCGTTCGTCGCCATTTCCATGATGACATCACTGTGGTGGTTTTATTTCTTGATACAAATCTGCTCTTCAAAGCTAGCTCCACGAAGAGCATGAGCGTCTCACTTCGAGGCGGTGGACTCAACCGGCTTCCTAACTCTTTATCCCCTGTCACTACGCCCGTGTAG 1158 45.16 MNFLRACFQSSSDRYGAGEIRGRQEGLLWYKDSGQHLNGEFSMSVIQANNLLEDQSQIESGSLSLQESGPRGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDLMSADVIRKAFQATEEGFLSIVRSQWPINPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRAVKATGEVLAIQLSTEHNVSNESVRQELQSLHPDDPQVVVLRHNVWRVKGIIQISRSIGDVYLKKAEFNKEPLYGKFRVQEPFRTPFLSAEPAISEIQLKPDDQFVIFASDGLWEHLSNQEAVDIVHSHKQSGSAKRLVRAALQVAAKKREMRYSDLKKIGRGVRRHFHDDITVVVLFLDTNLLFKASSTKSMSVSLRGGGLNRLPNSLSPVTTPV* 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4773126 4776280 - Chy1G006650.1 Chy01g00665 217846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00665 385 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 2 374 - -
Chy01g00665 385 CDD PP2Cc 41 348 IPR001932 -
Chy01g00665 385 PANTHER ALPHABET, ISOFORM E-RELATED 2 374 - -
Chy01g00665 385 ProSiteProfiles PPM-type phosphatase domain profile. 59 348 IPR001932 -
Chy01g00665 385 Pfam Protein phosphatase 2C 67 313 IPR001932 -
Chy01g00665 385 Gene3D - 26 357 IPR036457 -
Chy01g00665 385 SUPERFAMILY PP2C-like 44 349 IPR036457 -
Chy01g00665 385 ProSitePatterns PPM-type phosphatase domain signature. 74 82 IPR000222 GO:0043169
Chy01g00665 385 SMART PP2C_4 32 346 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00665 Chy11g00244 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00665 Chy-Chr1:4773126 Chy06g02254 Chy-Chr6:26572802 0 dispersed
Chy01g00665 Chy-Chr1:4773126 Chy11g00244 Chy-Chr11:2291313 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00665 - - csv:101211601 754.592