Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00682 ATGGACGACGGGGAGCTTGATTTTTCGAATCAGGATGTGTTTTCCAGCCCTAATATGGAGATTCCAAGCAGTTGTTCAATGGATAGTTTCTTTGATGAACTTCTCAAAGATACTCATACTTGTACTCATACACATACTTGCAATCCACCAGGCCCTGACTACTCTCACACCCACACGTGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCATCTGAAGAAGACAAGGTCGTTACTGATGATACTGCAGAATCAACTGAGAAGAAGTCGAAGAAACGTCCATTGGGTAACCGTGAAGCTGTTCGTAAGTACCGTGAGAAGAAAAAGGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGATTGAGGGCTTTGAATCAGCATTTGATGAAGAGGCTCCAGGGGCAAGCAGCACTTGAGGCTGAGATTGCTAGGCTTAAGTGTTTGCTTGTTGATATTAGGGGGAGAATTGAAGGGGAGATTGGTTCTTTCCCTTACCAGAAAGCTGTTAATCCTAACTTGTCCAACCCAAGCATGCCTGGTGCTTATGTGATGAACCCATGTAATATGCAGTGTGAGGATCAGGTCTACTGCCTCCATCCTGGAGTCGATGGCAGCAGAAGCAGTGAAGGTGCTGTGATTAATGGACAAAGCTTTGGTGCTTGTGAATTTGAAAATCTTCAATGTTTGGCAAATCATGACTCAGGATCAAAAGAACTACCTGGGTGTGGAGTAGGGAATGCGGTTTCAACTGATGTTTCTTCTGGGGCGACGAAGAAAAAAGGTAAAAACCGAGGCTTCCATCTTCATGATGACAATCCTTTCTTTCTTGTATTTCTTTATTCTCTGATTGTTTGTTCAATGATACATGTTCATCGAAGCAGGTTTGAGTTTCGCAGCTTACAAATATGTAATTTGATAGGCAAACTGTTCAGGAAGTATGAGCAATAG 951 43.22 MDDGELDFSNQDVFSSPNMEIPSSCSMDSFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLSNPSMPGAYVMNPCNMQCEDQVYCLHPGVDGSRSSEGAVINGQSFGACEFENLQCLANHDSGSKELPGCGVGNAVSTDVSSGATKKKGKNRGFHLHDDNPFFLVFLYSLIVCSMIHVHRSRFEFRSLQICNLIGKLFRKYEQ* 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4948386 4949336 - Chy1G006820.1 Chy01g00682 217863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00682 316 Coils Coil 98 132 - -
Chy01g00682 316 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Chy01g00682 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Chy01g00682 316 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Chy01g00682 316 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 241 - -
Chy01g00682 316 PANTHER BASIC LEUCINE ZIPPER 23 1 241 - -
Chy01g00682 316 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Chy01g00682 316 Gene3D - 75 153 - -
Chy01g00682 316 MobiDBLite consensus disorder prediction 71 98 - -
Chy01g00682 316 CDD bZIP 91 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00682 Chy11g00253 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00682 Chy-Chr1:4948386 Chy11g00253 Chy-Chr11:2378919 5.00E-140 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17285 PF07716 bZIP_2 1.10E-13 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00682 K25785 - csv:101208161 518.85