Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00687 ATGAACATCTTCCGCCGCTCTCCGCCGTCTTCCTCCGCCCTCAAATGGCTCGGCTTAGTTACCGCTATCTGGGTCCAATCCATCTCTGGTAACAACTACACCTTCTCCAACTACTCCGCCGCTCTTAAATCCCTCATGAATCTCTCTCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACCTCGGAAAAGCATTCGGTCTCCTCGCCGGTCTCGCCTCCGACCGCCTCTCCACTTCTCTCCTCCTCGTCATCGGCTCCATTGAAGGCCTTGTTGGCTACGGCGCTCAATGGCTCGTTGTCAGTCAAAAAATCAAACCCCTCCCTTACTGGCAGATGTGTATCTTTCTGTGTATGGGAGGGAATAGCACGACTTGGATGAACACCGGCGTGCTTGTTACTTGCTTAAGAAACTTCCGGAAAAACAGAGGAACTGTTTCTGGTATTCTCAAAGGCTACATCGCCCTCAGTACCGCCATTTTTACAGATTTTTGTTCCGCTCTTTTCTCTGATAACCCCTCTTCTTTTCTCGCCCTTCTCTCCCTTGTCCCCTTGGCCGTTTGCCTTGCTGCTATTCTCTTCCTTCGTGAAGTCCCCCGTTCCGCCGATGATGAAACAAAGGAGTTCAAATACTTCTGGGTACTCAACGCCGTTTCCGTCGCCGTTGCCGTCACTCTCTTGGTATTTGATTCGATTCCAAATCCCAACTCATTCCTATCGAGAATCTTCTCCATCGTTTTGCTGAGTTTGCTGGTTTCACCTCTGGTAATCCCACTTCACTCGTTCTTGAAAAGCAGGGGTGGGTCTGGTGAAGTTGCAGAGGCGCTGCTGGCGGGTGAGAGTGCGGCAGGTGATGCAGTGGAGGGTAAGCCGGTGATCGGAGAAGATCACACGATTGTTGAGGCGATGAAGACGGTTGAATTTTGGATTATGTTTGTGTCGTTTTTGTGTGGAGTGGGTACGGGATTGGCAGTGATGAACAATATGGGACAGATTGGATTGGCTCTTGGGTACGACGACGTTTCGATCTTCATATCGTTGATGAGCATTTGGGGGTTTTTTGGCCGGATTTTATCGGGATCGGCATCGGAGCATTTCATCAAGAAAGCAGGGATGCCAAGGCCACTATGGAATGCAGCTTCCCAAATTCTAATGGCACTTGGCTACATTCTCTTAGCCATTGCCATCCCCGGTTCCTTATACATTGGCTCCATCGTAGTCGGTATTTGCTACGGCGTCCGTCTCGCCATCACCGTCCCGATGGCCTCTGAAGTCTTTGGTCTCAAGAACTATGGCATGATCTACAACGTTCTAATCCTCAACCTCCCTCTTGGTTCGTTCCTTTTCTCAGGGCTCTTGGCTGGGATACTCTATGACATGGAGGCGACAACAACGAAGACGGGTGGCAATACGTGCGTGGGTGCGCATTGTTATAGGCTTGTGTTTGTTGTAATGGCTTGTTCATGTGCGATTGGGTTTGCCATGGACTTGTTTTTGGCCTTTAGAACCAAAAGATTGTACTCCAAAATGAGGGCCCTAAAGAGATGA 1548 49.87 MNIFRRSPPSSSALKWLGLVTAIWVQSISGNNYTFSNYSAALKSLMNLSQLQLNNLSVAKDLGKAFGLLAGLASDRLSTSLLLVIGSIEGLVGYGAQWLVVSQKIKPLPYWQMCIFLCMGGNSTTWMNTGVLVTCLRNFRKNRGTVSGILKGYIALSTAIFTDFCSALFSDNPSSFLALLSLVPLAVCLAAILFLREVPRSADDETKEFKYFWVLNAVSVAVAVTLLVFDSIPNPNSFLSRIFSIVLLSLLVSPLVIPLHSFLKSRGGSGEVAEALLAGESAAGDAVEGKPVIGEDHTIVEAMKTVEFWIMFVSFLCGVGTGLAVMNNMGQIGLALGYDDVSIFISLMSIWGFFGRILSGSASEHFIKKAGMPRPLWNAASQILMALGYILLAIAIPGSLYIGSIVVGICYGVRLAITVPMASEVFGLKNYGMIYNVLILNLPLGSFLFSGLLAGILYDMEATTTKTGGNTCVGAHCYRLVFVVMACSCAIGFAMDLFLAFRTKRLYSKMRALKR* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5016146 5021137 + Chy1G006870.1 Chy01g00687 217868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00687 515 Gene3D MFS general substrate transporter like domains 13 208 IPR036259 -
Chy01g00687 515 Gene3D MFS general substrate transporter like domains 302 506 IPR036259 -
Chy01g00687 515 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 283 514 - -
Chy01g00687 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 271 - -
Chy01g00687 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 283 514 - -
Chy01g00687 515 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 5 271 - -
Chy01g00687 515 CDD MFS_Mch1p_like 14 492 - -
Chy01g00687 515 Pfam Nodulin-like 15 259 IPR010658 -
Chy01g00687 515 SUPERFAMILY MFS general substrate transporter 32 505 IPR036259 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy01g00687 Chy11g00271 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00687 Chy-Chr1:5016146 Chy07g01584 Chy-Chr7:20019336 6.57E-108 dispersed
Chy12g00344 Chy-Chr12:3621882 Chy01g00687 Chy-Chr1:5016146 2.74E-74 dispersed
Chy01g00687 Chy-Chr1:5016146 Chy11g00271 Chy-Chr11:2518261 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00687 - - csv:101205980 894.034