Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00710 ATGGGTAGTAGCGTGTCAAAAGGAGCACCGGATTTCTGCACTGTATATGTCATCTCGAAGGGGAAGGTGTCATCGGTGAAGAATGCATCTCGCTCAGCTCCCTTCAGTTCCCCTCTACTAGACCGTTTACAGAAGTTATCTAAGCCGATCGTAAAGGGATCAATCACTCCTCGACATAAGTTCAATTTGAGAGATAGGACATCATTCAAGCCTCGCAGCTTCCAAGATGAAACAGTCAAGTCACCTTACTCTCACGGAGGAGAGAGAACTTGTATCTCGAAATTTAGTGGAGGGTTCTCTGAGTCAGAATCCGACATATCCTTTATAAGCTCTGGCAGACCAAGCACAGATCGTTCTTCTTCTGTTGCATTTGACTACTCTGATTCAGGTCCCCCACGATTTTCTACCAGCTCAGAGCATAGCTTTGCATCTCTACCATTTAAACCCAAGTGGACAGATCTCAGCAATCTCAATGATTTCTCATCGGTTTCAGATGAGAGCTGCAGGACATCATGTTCTTGGTCATCTCAGAACTTGGATGAAGTAGAACTTGAAATGAGGAGGCTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCGTGTAAAGAAGCACTAACAGCAAAGCAGAAGGCAATGGAACTAAATAATTGGAGACGTGAAGAAGAACAAAAACTAGAAGAGGCACGGCTTGCACAAGAAGCAGCAATGGCTATTGCAGAGCAGGAGAGAGCTAGATGCAGAGCAGCGATGGAAGCAGCTGATGCAGCCAAGAGAATTGCAGAGTTAGAATCACATAAAAGGGCAAATCTGGAGATGAAAGCAGTTAAAGAGGCAGAGGAAATGCAGAAAGCATTGAAAAATCTTGCACAAAGCGACATCAGATACAGGAGATATTCAATTGAGGAGGTTGAATCGGCGACGGAACATTTTGCACAATCTCGAAAGATTGGGGAAGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTTGATCACACATCAGTTGCAGTCAAGGTTTTGCGTCCTGACGCAACTCAAGGAAGGACACAGTTTCAGCAAGAGATTGATATACTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCTGAATATGGCATTCTAGTTTATGAGTACATGTCCAATGGAAGTTTGGAGGATCGACTCTTTCGAAAGGGTAACACCCCTGTTATTCCTTGGCAATTGAGGTTTCGAATTGCTGCCGAGATTGCTACTGGCCTTCTGTTTCTCCACCAGACAAAGCCTGAGCCATTGGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTTGACCAGAACTATGTTTCCAAGATCAGTGATGTTGGTTTGGCTAGACTTTTACCTGCTGTGGCTGAAAATGTAACACAATGCTACGTGACTTCGGCCGCTGGAACTTTCTGCTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGACGTGTATTCACTAGGAATCATGTTGCTTCAACTAATTACAGCGAAGCCGGCCATGGGGTTGGCTCACCATGTTGCTCGAGCTATCGAGAAGGGGACTTTTCAGGAGTTTCTGGACCCAGCTGTGGTTGATTGGCCAGTGGAACAAACACTTTGCTTTGCAAAATTAGCACTTGAATGTGCAGAACTTCGGCGAAAGGACCGACCAGATCTTGCCAGTGTTGTGTTGCCCGAACTTGAAAAATTGAGAGAATTTGGTGAAGAGATGATGGAGCACATGGAGTCAAGGGATAGTAGTGGATCGATAAGCAGTTTTAGCCATCCCTCAATGGAGCAGGACGTAATGAGCGACCCACAATTGACGATTTCAGAAAGTTCCAAGAGCCCGTCTAGTATATCATCACAGGTAGAAGGAGAATGA 1908 45.18 MGSSVSKGAPDFCTVYVISKGKVSSVKNASRSAPFSSPLLDRLQKLSKPIVKGSITPRHKFNLRDRTSFKPRSFQDETVKSPYSHGGERTCISKFSGGFSESESDISFISSGRPSTDRSSSVAFDYSDSGPPRFSTSSEHSFASLPFKPKWTDLSNLNDFSSVSDESCRTSCSWSSQNLDEVELEMRRLKLELKQTMEMYSTACKEALTAKQKAMELNNWRREEEQKLEEARLAQEAAMAIAEQERARCRAAMEAADAAKRIAELESHKRANLEMKAVKEAEEMQKALKNLAQSDIRYRRYSIEEVESATEHFAQSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDATQGRTQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEYMSNGSLEDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDQNYVSKISDVGLARLLPAVAENVTQCYVTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITAKPAMGLAHHVARAIEKGTFQEFLDPAVVDWPVEQTLCFAKLALECAELRRKDRPDLASVVLPELEKLREFGEEMMEHMESRDSSGSISSFSHPSMEQDVMSDPQLTISESSKSPSSISSQVEGE* 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5199310 5204531 + Chy1G007100.1 Chy01g00710 217891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00710 635 Pfam Protein kinase domain 314 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00710 635 ProSiteProfiles Protein kinase domain profile. 313 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00710 635 PANTHER OS02G0152300 PROTEIN 2 617 - -
Chy01g00710 635 Coils Coil 179 199 - -
Chy01g00710 635 MobiDBLite consensus disorder prediction 586 635 - -
Chy01g00710 635 Coils Coil 217 245 - -
Chy01g00710 635 Coils Coil 270 294 - -
Chy01g00710 635 PANTHER BNAA05G18880D PROTEIN 2 617 - -
Chy01g00710 635 SUPERFAMILY Protein kinase-like (PK-like) 295 571 IPR011009 -
Chy01g00710 635 SMART serkin_6 313 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00710 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Chy01g00710 635 MobiDBLite consensus disorder prediction 592 635 - -
Chy01g00710 635 Gene3D Phosphorylase Kinase; domain 1 277 385 - -
Chy01g00710 635 Gene3D Transferase(Phosphotransferase) domain 1 386 600 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00710 Chy-Chr1:5199310 Chy03g01203 Chy-Chr3:15140357 0 dispersed
Chy01g00710 Chy-Chr1:5199310 Chy04g00284 Chy-Chr4:2522498 2.97E-20 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70981 PF00069 Pkinase 2.40E-40 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00710 - - csv:101202855 1122.07