Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00757 ATGGGCGATACTCGAGGTGGTTGCTGTCCATCCATGGATCTCTTCCGCTCCGAGCCTATGCAGCTCGTCCAGCTTATCATTCCCATCGAGTCTGCGCATCGCACCATCTCCTACCTCGGTGATCTCGGCCTTCTTCAGTTCAAAGATCTCAACGCGGATAAAAGCCCATTCCAGCGTACTTATGCTGCACAGATTAAAAGATGTGGAGAGATGGCACGCAAATTGAATTTTTTCAAGGAACAGATATTGAAGGCTGGATTATCAAGCAAAAGCTCCGTGTCACAAGTTGATATCAATATAGACGACCTTGAGGTCAAACTTGGTGAGCTTGAGGCAGAACTGGTTGAGATAAATGCCAATAGTGAGAAGCTACAGCGTTCCTACAATGAACTTTTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGAGAGTTTTTCATTGCAGCGCAAAGCAGTGCTGTAGAGCAGCAAAGGGAGTTTGAATCACGACAAACTGGTGGAGATTCAATAGAAGTTCCATTGTTGTTGGAACAAGAATCACTTGTGGATCAGTCAAAGTCGGTTAATTTGGGATTTCTCTCTGGTCTTGTTCCTCGGGAAAAATCTATGGCATTTGAGAGGATACTTTTTCGTGCTACCAGGGGCAATGTGTTTTTGAAGCAGACTGCTGTTGAGGATCCTGTTGCAGATCCTGTTTCTGGAGAGAAGGTTGAAAAAAATGTGTTTATTGTTTTCTACTCTGGAGAAAGAGCAAAGAATAAAATTCTGAAAATATGTGAGGCATTTGGTGCAAATCGATACCCTTTTACTGAGGATGTGGGGAAACAAGCCCAAATGATTGCTGAGGTTTCTGGAAAACTGTCTGAGCTGAAGACTACAATAGATATAGGGCTGCTGCACCGGGGTAATCTGTTGCAGACTATTGGAGAACATTTTGAAAATTGGAATCTCCTGGCGAGGAAGGAAAAGTCCATATACCATATCTTGAACATGCTTAGCCTTGATGTAACAAAAAAATGTCTGGTCGCTGAGGGGTGGGGTCCTGTTTTTGCTACAAAGCAGATCCAAGATGCACTCCAGCGAGCAGCATCTGATTCCAACTCCCAGGTTGGACCAATTTTCCAGGTTTTATTAACCACAGAGGCACCACCTACGTATTTTCGGACAAACAAATTCTCCTCTGCTTTTCAAGAAATTGTCGATGCCTATGGGGTGGCAAGGTATCAAGAAGCAAATCCTGGTGTATACACCATTGTCACGTTCCCATTTCTATTTGCTGTTATGTTTGGCGATTGGGGGCATGGAATATGTCTGCTCCTTGCAACCCTGTATTTTATATTACGGGAAAAAAAACTTTCTTCTCAGAAGCTTGGAGATATCACTGAAATGGCCTTTGGTGGACGCTATGTCATTTTGATGATGTCACTATTTTCAATATACACTGGTCTGATCTATAATGAGTTCTTTTCAGTCCCATTTGGACTGTTTGGTCGCTCAGCCTATGCATGTCGTAGTCCTGATTGCAGTGATTCTACCACTGTGGGGTTACTAAAGGTGGGTTCTACATATCCATTTGGCTTGGATCCTGTATGGCATGGCACTCGAAGTGAACTTCCATTTCTCAACTCTTTGAAAATGAAAATGTCCATCCTCCTTGGAGTTGCACAAATGAACCTTGGAATTATAATAAGCTATTTCAATGCTACATTTTTTAGGAACAGCATTAATATCTGGTTCCAATTTCTACCACAAATGATATTCCTGAACAGCCTATTCGGCTATCTTTCCCTTCTCATCATCATAAAGTGGTCCACTGGTTCAAATGCTGATCTGTACCATGTAATGATATACATGTTTCTAGGCCCTACTGCAGATCTGGCTGAAAACCAACTTTTTCCTGGGCAGAAAAATGTTCAGATTGTGCTGCTCTTACTGGCCCTTGTTGCCGTGCCGTGGATGCTGCTTCCAAAGCCTTTTCTTTTGAAGAGACAGCATGAACAGAGGTTCCAAGGTCAATCTTATGCGCCGCTTCCAAGTGGTGATGATTCCCTTGAGTTGGATTCACATCATGATTCGCATGGTCACGAGGAGTTCGAGTTCAGTGAGATTTTTGTGCATCAGCTTATTCATACCATTGAATTTGTGCTTGGAGCAGTGTCAAATACAGCTTCCTATCTTCGTCTATGGGCTTTAAGTCTTGCGCACTCAGAGTTGTCAAGCGTGTTTTACGACAAGGTTCTCGTTCTATCAGCGGGGTTCAACAACATTATAATCTTAATAGTAGGCATTATCGTTTTCATTTTTGCTACGGTTGGGGTGTTGCTACTGATGGAGACTTTAAGTGCCTTCCTTCATGCACTACGTCTTCATTGGGTTGAGTTCCAAAACAAGTTCTACGAGGGAGACGGATACAAATTCCATCCTTTTTCATTCGCATTGCTAGATGAAGATGATGATTGA 2457 42.86 MGDTRGGCCPSMDLFRSEPMQLVQLIIPIESAHRTISYLGDLGLLQFKDLNADKSPFQRTYAAQIKRCGEMARKLNFFKEQILKAGLSSKSSVSQVDINIDDLEVKLGELEAELVEINANSEKLQRSYNELLEYKLVLQKAGEFFIAAQSSAVEQQREFESRQTGGDSIEVPLLLEQESLVDQSKSVNLGFLSGLVPREKSMAFERILFRATRGNVFLKQTAVEDPVADPVSGEKVEKNVFIVFYSGERAKNKILKICEAFGANRYPFTEDVGKQAQMIAEVSGKLSELKTTIDIGLLHRGNLLQTIGEHFENWNLLARKEKSIYHILNMLSLDVTKKCLVAEGWGPVFATKQIQDALQRAASDSNSQVGPIFQVLLTTEAPPTYFRTNKFSSAFQEIVDAYGVARYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFILREKKLSSQKLGDITEMAFGGRYVILMMSLFSIYTGLIYNEFFSVPFGLFGRSAYACRSPDCSDSTTVGLLKVGSTYPFGLDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIISYFNATFFRNSINIWFQFLPQMIFLNSLFGYLSLLIIIKWSTGSNADLYHVMIYMFLGPTADLAENQLFPGQKNVQIVLLLLALVAVPWMLLPKPFLLKRQHEQRFQGQSYAPLPSGDDSLELDSHHDSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLVLSAGFNNIIILIVGIIVFIFATVGVLLLMETLSAFLHALRLHWVEFQNKFYEGDGYKFHPFSFALLDEDDD* 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5656055 5666743 + Chy1G007570.1 Chy01g00757 217938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00757 818 PANTHER VACUOLAR PROTON ATPASES 6 818 IPR002490 GO:0033179|GO:0046961|GO:1902600
Chy01g00757 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 4 817 - -
Chy01g00757 818 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 6 818 - -
Chy01g00757 818 Coils Coil 93 127 - -
Chy01g00757 818 Pfam V-type ATPase 116kDa subunit family 38 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Chy01g00757 818 PIRSF ATP6V0A1 10 818 IPR026028 GO:0000220|GO:0046961
Chy01g00757 818 PANTHER VACUOLAR PROTON ATPASES 4 817 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00757 Chy-Chr1:5656055 Chy11g01306 Chy-Chr11:19304033 0 dispersed
Chy01g00757 Chy-Chr1:5656055 Chy03g01413 Chy-Chr3:16871625 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00757 K02154 - csv:101211364 1556.19