Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00759 ATGAGAATAGAGGAGAAGATGAGCGTTGCGGGGTTTTCTTGTTCTTCTTTTGTTGTAGTTATTGCTGTTTTGGTTATGGTTTTGAATGGAGTGGAGGTGTGTTATGGAGGTAAAACAGGACAGTTTATGAGGAAGGTTGAGAAAACTGTGGATATGCCTCTTGACAGTGATGTTTTTGCTGTTCCTTCTGGTTTTAATGCTCCCCAGCAGGTCTTTTTCTCCTTAAATTTTCCCTTTCTTCTTTCTTCTTGTAGTGTTCATATCACACAAGGAGATCATGAAGGGAAGGCAGTGATTGTTTCATGGGTCACTCCAAATAAACCAGGATCAAATGAAGTATTGTATTGGAGTGAGAAAAGCAAGCAAAAGAAACAGGCCTTTGGAAAAGTATATACTTACAAGTTCTATAATTACACTTCTGGTTACATTCATCACTGTACCATTAAAAACTTAAAGTACGACACCAAATACTACTATGAAATCGGAATTGGGTCCTCTCCAAGAACATTCTGGTTTGTCACTCCTCCAGAAGTCGGTCCCGACGTTCCCTATACATTTGGTGTCATAGGTGAGTTAATTTTCGATGCCACAGTCGTCTTGTTTGTTTTTCCAGTTGAATTCCGGCTTAGCTATCCAATTGGCACGTCCATTGTCTTGCTTTTAATGTCATCTGCAGGGGATCTTGGCCAGAGTTTTGATTCAAATGTAACACTGACACACTACGAACGAAACCCGCATAAAGGAAAAGCAGTGTTATTTGTTGGAGATCTCTCTTATGCTGACAACTATCCATTCCATGACAATGTAAGGTGGGATACATGGGGAAGATTCACAGAGAGAATCATCGCCTATCAACCTTGGATATGGACTGCAGGAAATCATGAAATTGATTTTGTCCCAGAAATTGGTGAGACCGAGCCTTTCAAGCCATTTACGAACCGATATCATGTCCCTTATAAAGCATCTGGGAGCACAGCTCCTTTTTGGTACTCAATCAAGAGAGGTCCAGCGTACATCATAGTCTTGGCTTCATATTCAGCTTATGGTAAATACACTCCTCAATACGAATGGCTTGAAGCAGAGCTACCGAAAGTTAACAGAAGTGAAACACCATGGTTAATTGTTCTTATGCATTCCCCGTGGTACAACAGCTACAACTATCACTACATGGAAGGAGAAACAATGCGAGTGATGTATGAGTCATGGTTTGTACAATACAAAGTTGACGTCGTCTTTGCTGGCCATGTCCATGCTTATGAAAGATCTGAAAGAATTTCAAATGTTGCATACAACATCGTGAATGGCCATTGTACTCCAGTGAAAGATCAATCTGCACCTGTATACATAACAATAGGTGATGGAGGAAACCTTGAAGGCCTAGCAACCAATATGACGGAGCCACAACCTGCGTACTCGGCGTATCGTGAAGCAAGCTTTGGCCATGCCATATTTGATATAAAGAACAGAACTCATGCGTATTTCAGTTGGAGCAGGAATCAAGATGGATATGCAGTTGAAGCTGATACTCATTGGTTCTTGAACAGACACTGGCACCCGGTTGACGAGTCGTTGAGTGAGCAGAAATGA 1587 41.4 MRIEEKMSVAGFSCSSFVVVIAVLVMVLNGVEVCYGGKTGQFMRKVEKTVDMPLDSDVFAVPSGFNAPQQVFFSLNFPFLLSSCSVHITQGDHEGKAVIVSWVTPNKPGSNEVLYWSEKSKQKKQAFGKVYTYKFYNYTSGYIHHCTIKNLKYDTKYYYEIGIGSSPRTFWFVTPPEVGPDVPYTFGVIGELIFDATVVLFVFPVEFRLSYPIGTSIVLLLMSSAGDLGQSFDSNVTLTHYERNPHKGKAVLFVGDLSYADNYPFHDNVRWDTWGRFTERIIAYQPWIWTAGNHEIDFVPEIGETEPFKPFTNRYHVPYKASGSTAPFWYSIKRGPAYIIVLASYSAYGKYTPQYEWLEAELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYESWFVQYKVDVVFAGHVHAYERSERISNVAYNIVNGHCTPVKDQSAPVYITIGDGGNLEGLATNMTEPQPAYSAYREASFGHAIFDIKNRTHAYFSWSRNQDGYAVEADTHWFLNRHWHPVDESLSEQK* 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5672319 5675558 + Chy1G007590.1 Chy01g00759 217940

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00759 528 Gene3D - 84 178 - -
Chy01g00759 528 Gene3D - 220 524 IPR029052 -
Chy01g00759 528 CDD MPP_PAPs 226 514 IPR041792 -
Chy01g00759 528 Pfam Calcineurin-like phosphoesterase 226 419 IPR004843 GO:0016787
Chy01g00759 528 Pfam Iron/zinc purple acid phosphatase-like protein C 445 504 IPR025733 -
Chy01g00759 528 SUPERFAMILY Metallo-dependent phosphatases 229 522 IPR029052 -
Chy01g00759 528 Pfam Purple acid Phosphatase, N-terminal domain 85 168 IPR015914 GO:0003993|GO:0046872
Chy01g00759 528 SUPERFAMILY Purple acid phosphatase, N-terminal domain 49 176 IPR008963 GO:0003993|GO:0046872
Chy01g00759 528 PANTHER ACID PHOSPHATASE RELATED 223 526 IPR039331 GO:0003993
Chy01g00759 528 PANTHER ACID PHOSPHATASE RELATED 15 192 IPR039331 GO:0003993
Chy01g00759 528 PANTHER PURPLE ACID PHOSPHATASE 15 192 - -
Chy01g00759 528 PANTHER PURPLE ACID PHOSPHATASE 223 526 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00759 K22390 ACP7; acid phosphatase type 7 - csv:101211612 973.77
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00759 Chy-Chr1:5672319 Chy02g00604 Chy-Chr2:3669549 0 dispersed
Chy01g00759 Chy-Chr1:5672319 Chy03g01418 Chy-Chr3:16917771 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g11 . . . . . . . . . . . . . . . Cpe04g00114 . . . . . . . . Cla02g00499 Cam02g0509 Cec02g0509 Cco02g0515 Clacu02g0511 Cmu02g0507 Cre02g0840 . . . . . . . Cme01g01364 Blo04g00527 . . Bda14g00570 . . Bma03g00564 . . . . . . . . . . . . . . . . . . . . . . . . Lsi11g01126 . Chy01g00759 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000712 2 3 4 4 1 3 4 3 3 3 3 3 3 3 3 3 3 5 4 3 4 3 3 3 3 3 3 4 3 5 97
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy01g00759 Chy_Chr01 FPKM 0.0 0.0 0.0 0.0 21.206707 20.489872 18.980812 0.0 0.0 0.0