Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00774 ATGCTGCACTGTTTGAACGCAACCGGGAACTGTTCTGATACTCTCAGTGTTCTTGAGAGGCAGAGAGCTCGTTTGAAATGGCAACAAGATCAGCTTTTCCAGCAGCCGTTAAATCAAAGCTGTTTCAGTAGAGCTGACTATGGCGGTGGATTTCCGCCGCCGGTTTCAGTTCCAGCCGATCATCTTACGGGATTTCCAGGGTACATGAGTGGCGGCGGTGGGGTTGGTGGTGGATTATCACATGTTGAGATGGTAATGGGGGCAGTGAAGCCTGACCCTGGGTTGGAAGATGGGTGGTCCGAAATGGGGAAGTTTGATCCTTCTTTGTTGTTGAATGCCACTGCTTGTGAGCTTAACTCTTCTCTCTCTAGAACCTCCAGCTGCCTGCCGGTGGTGGCTCCGACGATGGCGGAGAAGATGGGGTCCATGGCTGGAAGAGAGAACTTCAAGAAAAGGAAAGCTGAGAAAGCTCACAACACTACCACCACCACCACCAACAATAACAAGGCAACTGATACCTCAAAAGAAAACTCTAAAGCTTCAGAAGTTCATAAGCCTGATTACATTCATGTCAGAGCTCGCCGTGGCCAAGCCACTGATAGTCATAGCTTAGCTGAAAGAGCTAGAAGGGAAAAAATCAGTGAGAGAATGAAATACTTGCAAGATTTAGTACCAGGATGCAATAAAATCACTGGAAAAGCTGGAATGCTAGATGAGATCATAAACTATGTTCAATCTCTTCAGAGACAAGTTGAGTTCTTGTCCATGAAGTTAGCTGCTGTTAATCCAAGGTTGGACTTCAATGTCGATGATCTCTTCAACAAAGAGGTTTTCCCTCCATCTTGCACCGCAGCAAACTTCCCGTCAATCGGCGGAATGTCATCGGAAATGACAGATCCTTCTTCCTACTTGCAATTCAATCCAAATAATCAACAAATGGACTCGTGTTGTGGGTTAGAAATGGGAATCAATACCTCCCATGTCGCTCTTCGAAGAACAATCAGCGCCCCTGTTTCTTTCCCAGAAAATTTCCTCGACTCATCTTGCCTCACGCAATTTCAACCCTCTTCAGGGTGGGATGTGGATTTGCAGAATATGTACAATGTGGGTTTCGATCAAGGAAGATCATCAAACGCCTTTTCATCTCAGCCATATACAGGTTCAATTGAATCAGGGAATATAAAGATGGAAATGTGA 1197 45.7 MLHCLNATGNCSDTLSVLERQRARLKWQQDQLFQQPLNQSCFSRADYGGGFPPPVSVPADHLTGFPGYMSGGGGVGGGLSHVEMVMGAVKPDPGLEDGWSEMGKFDPSLLLNATACELNSSLSRTSSCLPVVAPTMAEKMGSMAGRENFKKRKAEKAHNTTTTTTNNNKATDTSKENSKASEVHKPDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFNVDDLFNKEVFPPSCTAANFPSIGGMSSEMTDPSSYLQFNPNNQQMDSCCGLEMGINTSHVALRRTISAPVSFPENFLDSSCLTQFQPSSGWDVDLQNMYNVGFDQGRSSNAFSSQPYTGSIESGNIKMEM* 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5949888 5952643 - Chy1G007740.1 Chy01g00774 217955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00774 398 Gene3D - 194 268 IPR036638 GO:0046983
Chy01g00774 398 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 160 378 - -
Chy01g00774 398 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 247 IPR011598 GO:0046983
Chy01g00774 398 MobiDBLite consensus disorder prediction 151 185 - -
Chy01g00774 398 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 160 378 IPR024097 GO:0006355
Chy01g00774 398 SMART finulus 203 253 IPR011598 GO:0046983
Chy01g00774 398 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 14 169 IPR024097 GO:0006355
Chy01g00774 398 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 14 169 - -
Chy01g00774 398 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 195 266 IPR036638 GO:0046983
Chy01g00774 398 Pfam Helix-loop-helix DNA-binding domain 201 248 IPR011598 GO:0046983
Chy01g00774 398 MobiDBLite consensus disorder prediction 159 174 - -
Chy01g00774 398 CDD bHLH_AtBPE_like 187 272 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00774 Chy-Chr1:5949888 Chy01g01416 Chy-Chr1:19575646 3.88E-48 dispersed
Chy02g02535 Chy-Chr2:28660503 Chy01g00774 Chy-Chr1:5949888 1.90E-43 transposed
Chy03g00988 Chy-Chr3:13411240 Chy01g00774 Chy-Chr1:5949888 2.52E-44 transposed
Chy04g01755 Chy-Chr4:23915884 Chy01g00774 Chy-Chr1:5949888 5.09E-46 transposed
Chy06g00829 Chy-Chr6:5866149 Chy01g00774 Chy-Chr1:5949888 1.74E-50 transposed
Chy09g00423 Chy-Chr9:3739941 Chy01g00774 Chy-Chr1:5949888 6.20E-53 transposed
Chy01g00774 Chy-Chr1:5949888 Chy11g00377 Chy-Chr11:3494250 1.80E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17293 PF00010 HLH 1.10E-06 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00774 - - csv:101216907 726.472