Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00791 ATGGCGGTTTCCGGTAGCAATTCGACCCAGATTCACCCTTCTGACCAATCTCCCTCCACTTCTTCCGAAACTTCTCTATCCAACTTGAAAATCTACGCCGCCATAGGTGTTATAGCTGCATGTATGATTGCAGCTTCTGGTTTAATCTTCTTATGTGTCCGTAGAAGTAGGGAATCGAGGAAGCATAAAATGCGGGTGAAACATAGTTCTGGGTTGATTCCATTGGTTTCCAAGGAGATCGCTGAGATTAAAGAGTCCGATCGGACTGTGGATTGCGAGAAAGGGGAAGTTATTAGGGTTGAGAATAAAAAGGAGATTGAGTTCGAGAATGGTGTAAGTAAGAAGAGTCAAGAAAGCGACGTGTCCGGAGGTGGTCGGAGCGATGTGTCGGTGGAGGATCCGAACTTAGGGTGGGGACGGTGGTATAGCTTAAAGGAACTAGAAATGGCGACTGATGGGTTTGTGGAAGAGAATGTGATTGGAGAAGGAGGCTACGGCATCGTGTACAGAGGAGTTTCGCCGGACGGTTCCGTCGTCGCCGTGAAGAATCTTCTTAATAATAAAGGTCAGGCAGAGAAAGAGTTCAAGGTTGAAGTAGAGGCCATTGGAAAAGTAAGGCACAAGAACTTGGTGGGTCTGATAGGTTATTGTGCAGAAGGAGCTCAGAGGATGCTTGTGTATGAATTTGTTGATAATGGCAACTTGGAGCAATGGTTACATGGTGATGTAGGGCCTGTTAGCCCTCTAACATGGGAGATTAGGATGAAGATTGCTCTTGGAACAGCAAAAGGTTTGGCCTATTTGCATGAGGGTTTAGAACCAAAAGTTGTGCACCGTGATGTAAAGTCCAGCAACATTCTCTTAGACAGAAAATGGAATGCAAAAGTTTCTGATTTTGGACTTGCAAAGCTCTTACAATCTGAAGCCAGCTACGTAACTACTCGTGTAATGGGTACCTTTGGATATGTCTCCCCAGAGTATGCAAGCACAGGCATGCTTAATGAGGGGAGTGATGTATATAGTTTCGGTGTTCTACTTATGGAGATCATTACTGGCAGAAGCCCAATTGACTATTCTCGGCCCCCAGGAGAGATGAACTTGGTGGACTGGTTTAAAGGGATGGTGGCAAATAGACGTGGTGAAGAGGTAGTAGATCCATTGATTGAGATTCCACCCTCTCCTAGAACTCTAAAGAGAGTGTTGCTTGTTTGTCTACGCTGCATTGATTTGGATGCCAATAAAAGGCCAAAGATGGGGCAAATCGTTCATATGCTAGAGGCAGATGATTTTCCTTATCGTTCGGAGCTTCGATCTGTGCGAGAGAAAGATAGCCAGCCTGCTGCTCGTTCAGACGTGCCGAGTAAACTTCCATTAAAGCATGCTGGTATAGATCACATGCAATAA 1404 45.37 MAVSGSNSTQIHPSDQSPSTSSETSLSNLKIYAAIGVIAACMIAASGLIFLCVRRSRESRKHKMRVKHSSGLIPLVSKEIAEIKESDRTVDCEKGEVIRVENKKEIEFENGVSKKSQESDVSGGGRSDVSVEDPNLGWGRWYSLKELEMATDGFVEENVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCAEGAQRMLVYEFVDNGNLEQWLHGDVGPVSPLTWEIRMKIALGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLQSEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVVDPLIEIPPSPRTLKRVLLVCLRCIDLDANKRPKMGQIVHMLEADDFPYRSELRSVREKDSQPAARSDVPSKLPLKHAGIDHMQ* 468
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6342088 6345841 + Chy1G007910.1 Chy01g00791 217972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00791 467 CDD STKc_IRAK 160 426 - -
Chy01g00791 467 Gene3D Transferase(Phosphotransferase) domain 1 230 439 - -
Chy01g00791 467 Gene3D Phosphorylase Kinase; domain 1 128 229 - -
Chy01g00791 467 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Chy01g00791 467 SUPERFAMILY Protein kinase-like (PK-like) 130 426 IPR011009 -
Chy01g00791 467 SMART serkin_6 154 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00791 467 MobiDBLite consensus disorder prediction 1 23 - -
Chy01g00791 467 ProSiteProfiles Protein kinase domain profile. 154 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00791 467 MobiDBLite consensus disorder prediction 111 130 - -
Chy01g00791 467 PANTHER OS03G0227900 PROTEIN 16 442 - -
Chy01g00791 467 Pfam Protein kinase domain 155 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00791 467 PANTHER OS01G0323000 PROTEIN 16 442 - -
Chy01g00791 467 MobiDBLite consensus disorder prediction 439 467 - -
Chy01g00791 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00791 Chy-Chr1:6342088 Chy03g01555 Chy-Chr3:17717842 6.37E-172 dispersed
Chy01g00791 Chy-Chr1:6342088 Chy06g00152 Chy-Chr6:1007186 3.76E-178 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70983 PF00069 Pkinase 1.00E-45 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00791 - - csv:101219201 904.82