Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00791 | ATGGCGGTTTCCGGTAGCAATTCGACCCAGATTCACCCTTCTGACCAATCTCCCTCCACTTCTTCCGAAACTTCTCTATCCAACTTGAAAATCTACGCCGCCATAGGTGTTATAGCTGCATGTATGATTGCAGCTTCTGGTTTAATCTTCTTATGTGTCCGTAGAAGTAGGGAATCGAGGAAGCATAAAATGCGGGTGAAACATAGTTCTGGGTTGATTCCATTGGTTTCCAAGGAGATCGCTGAGATTAAAGAGTCCGATCGGACTGTGGATTGCGAGAAAGGGGAAGTTATTAGGGTTGAGAATAAAAAGGAGATTGAGTTCGAGAATGGTGTAAGTAAGAAGAGTCAAGAAAGCGACGTGTCCGGAGGTGGTCGGAGCGATGTGTCGGTGGAGGATCCGAACTTAGGGTGGGGACGGTGGTATAGCTTAAAGGAACTAGAAATGGCGACTGATGGGTTTGTGGAAGAGAATGTGATTGGAGAAGGAGGCTACGGCATCGTGTACAGAGGAGTTTCGCCGGACGGTTCCGTCGTCGCCGTGAAGAATCTTCTTAATAATAAAGGTCAGGCAGAGAAAGAGTTCAAGGTTGAAGTAGAGGCCATTGGAAAAGTAAGGCACAAGAACTTGGTGGGTCTGATAGGTTATTGTGCAGAAGGAGCTCAGAGGATGCTTGTGTATGAATTTGTTGATAATGGCAACTTGGAGCAATGGTTACATGGTGATGTAGGGCCTGTTAGCCCTCTAACATGGGAGATTAGGATGAAGATTGCTCTTGGAACAGCAAAAGGTTTGGCCTATTTGCATGAGGGTTTAGAACCAAAAGTTGTGCACCGTGATGTAAAGTCCAGCAACATTCTCTTAGACAGAAAATGGAATGCAAAAGTTTCTGATTTTGGACTTGCAAAGCTCTTACAATCTGAAGCCAGCTACGTAACTACTCGTGTAATGGGTACCTTTGGATATGTCTCCCCAGAGTATGCAAGCACAGGCATGCTTAATGAGGGGAGTGATGTATATAGTTTCGGTGTTCTACTTATGGAGATCATTACTGGCAGAAGCCCAATTGACTATTCTCGGCCCCCAGGAGAGATGAACTTGGTGGACTGGTTTAAAGGGATGGTGGCAAATAGACGTGGTGAAGAGGTAGTAGATCCATTGATTGAGATTCCACCCTCTCCTAGAACTCTAAAGAGAGTGTTGCTTGTTTGTCTACGCTGCATTGATTTGGATGCCAATAAAAGGCCAAAGATGGGGCAAATCGTTCATATGCTAGAGGCAGATGATTTTCCTTATCGTTCGGAGCTTCGATCTGTGCGAGAGAAAGATAGCCAGCCTGCTGCTCGTTCAGACGTGCCGAGTAAACTTCCATTAAAGCATGCTGGTATAGATCACATGCAATAA | 1404 | 45.37 | MAVSGSNSTQIHPSDQSPSTSSETSLSNLKIYAAIGVIAACMIAASGLIFLCVRRSRESRKHKMRVKHSSGLIPLVSKEIAEIKESDRTVDCEKGEVIRVENKKEIEFENGVSKKSQESDVSGGGRSDVSVEDPNLGWGRWYSLKELEMATDGFVEENVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLIGYCAEGAQRMLVYEFVDNGNLEQWLHGDVGPVSPLTWEIRMKIALGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLQSEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVVDPLIEIPPSPRTLKRVLLVCLRCIDLDANKRPKMGQIVHMLEADDFPYRSELRSVREKDSQPAARSDVPSKLPLKHAGIDHMQ* | 468 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6342088 | 6345841 | + | Chy1G007910.1 | Chy01g00791 | 217972 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00791 | 467 | CDD | STKc_IRAK | 160 | 426 | - | - | |
Chy01g00791 | 467 | Gene3D | Transferase(Phosphotransferase) domain 1 | 230 | 439 | - | - | |
Chy01g00791 | 467 | Gene3D | Phosphorylase Kinase; domain 1 | 128 | 229 | - | - | |
Chy01g00791 | 467 | ProSitePatterns | Protein kinases ATP-binding region signature. | 160 | 182 | IPR017441 | GO:0005524 | |
Chy01g00791 | 467 | SUPERFAMILY | Protein kinase-like (PK-like) | 130 | 426 | IPR011009 | - | |
Chy01g00791 | 467 | SMART | serkin_6 | 154 | 425 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g00791 | 467 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Chy01g00791 | 467 | ProSiteProfiles | Protein kinase domain profile. | 154 | 433 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g00791 | 467 | MobiDBLite | consensus disorder prediction | 111 | 130 | - | - | |
Chy01g00791 | 467 | PANTHER | OS03G0227900 PROTEIN | 16 | 442 | - | - | |
Chy01g00791 | 467 | Pfam | Protein kinase domain | 155 | 423 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g00791 | 467 | PANTHER | OS01G0323000 PROTEIN | 16 | 442 | - | - | |
Chy01g00791 | 467 | MobiDBLite | consensus disorder prediction | 439 | 467 | - | - | |
Chy01g00791 | 467 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 276 | 288 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00791 | Chy-Chr1:6342088 | Chy03g01555 | Chy-Chr3:17717842 | 6.37E-172 | dispersed | |
Chy01g00791 | Chy-Chr1:6342088 | Chy06g00152 | Chy-Chr6:1007186 | 3.76E-178 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
70983 | PF00069 | Pkinase | 1.00E-45 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00791 | - | - | csv:101219201 | 904.82 |