Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00846 ATGCATACCCTTCTGATTTGTGAAAAGTATTCTTCTCAATCAGCTTCTCTATTTCCTGGATTGGACGTGGGCACAAAAACTAAAACTGGAGCTTTGCGCTTTGAAGAAACAAAAGAAAGAATAAAAAAATTGTTCAAAAATGTTGAACTTTCAATTTCTGCATATGATACTGCATGGGTGGCAATGGTCCCTTCTCCAAACTCTCTTAATAAACCTCTTTTTCCTGAGTGCATAAACTGGGTATTAGATCATCAAAACCCTGATGGGTCATGGGGCATACTCCATGACCATCAGTTGGTGATGAAAGCCACCCTCTTATCCACATTAGCATGTGTTCTTACTCTTAAGCGATGGGATATCGGTGATCATCATATGAGCAAGGCCCTTAGTTTTATCAAGTCTAATATAGCTTCAGCTACTGATGAGAATCAACGTTCTCCTGTGGGATTTGACATAATTTTTCCTGGTATGATTGAGTATGCTAAAGACTTGAATTTGAATCTACCCTTGGCATCAATGAATGTGGATGCTTTGGTTCAAAAGAAAGAGTTGGAGCTTAGAAGCTGCTGTAGCAACTCTGAAGGAGGAAAAGCCTATTTAGCGTATGTTTCAGAAGGAATTGGAAAATTACAGGACTGGGAAATGGTCATGAGATATCAAAGGAAGAACGGATCACTGTTTAGTTCTCCATCCACCACAGCAGTGGCTTTTATGCACAGAAATGATGATGGCTGTTTTAATTACCTTCGCTCAGTCTTACAAAAGTTTCATAGTTCAGTTCCCGCAATATATCCTCTTGATATATATGCTCGTTTACACATGGTTGATAGCCTTCAAAAACTGGGGATTGATCGCCATTTCAAAGATGAGATTAGAAGTGTATTAGATGAAACATACAGCTGTTGGATGCAAGGGGAAGAAAATATATTCCTAGATGCTTCAACTTGTGCACTGGCCTTCCGGATGTTACGTGTTGAAGGATATGATGTTTCTTCAGATCAATTGACTCAATTCTCAGAAGGTCTCTTTTCAAATTGCCTCAGAGGACATTTAAAAGACTTTGGTGCTTCACTAGAGTTATTTAAGGCCTCCCAGATTATCATTTATCCGGATGAGTTTATTCTGGAAAATATAAATTCTTGGACTAGTCGTTTCCTGAATCATGGAATATCTGGTGGTTTAGTTCGTTCTGATAGAACTGAGAGACTCGTGAAACAAGAGGCAGTTAATGCTTTCGAGTTCCCCTATAATTCAACTCTGGAACGCTTATCAAATAAGCGAGCACTGGAAAGTTACAGTGGAGACATTGTGAGGATTTCAAAAACAACATACGCCTGCTTAAATTTTGGTCATCAAGATTTCCTGGAACTTGCTGTAGAAGATTTCAATACCTTGCAATGCATACATCGCAAGGAACTGAAAGAGCTTGAAAAATGGGTCATCGAAAACAAATTGGACAAGTTGAAATTTGCGAGACAGAAGTTAGCGTACTGCTATTTTTCTGCTGCAGCGACCCTAACCTCTCCAGAACTTTGTGATGCCCGCTTATCATGGGCAAAAAATGGGGTACTTACAACCGTGGTTGATGATTTCTTTGATGTTGGAGGATCTGAAGAGGAATTGGTAAACCTTATACAATTGGTGGAAAAGTGGGATGCCAGTGGGGAAACGGGTTACTGTTCCAAGGAGGTTGAGATTATATTTCTTGCACTTCATAGCACAACTTGTGAAATAGGAAAAAAAGCTTTACCTTGGCAAGGACGCAGCGTGATGAGGAATGTTATCGATATTTGGTTGGCTTTGCTCGAGTCAATGAGGAAGGAAGCTGAATGGTTGAAAAATAAGGTAGTGCCATCATTGGATGAGTACATGGAAAATGGCTATGTATCATTTGCTTTGGGACCTATAGTCCTTCCAACGCTCTACTTTGTTGGACCTAAGCTTCCAGAGGAAATTGTTGGAAATTGTGAATACAAGAAGCTCTTTAAGCTGATGAGCACTTCTGGCCGCCTTCTGAATGATACTCGAACTTATGATAGAGAGTCCAGTGAAGGGAAACTGAATACCTTGTCTCTATACATGATTAGTGCCGGTGGTAAGCTCACCAAAGAGGAGGCCACTGAAGCAATGAAAGGAGATGTTGATAGGACGCGAAGAGAACTGTTGAGATTAGTTTTGCAGGAGAACAGTACAATTCCAAGAGCTTGTAAGGATTTGTTCTGGAAAATGAGCTGTGTTGTGCATCTATTTTACAGGAAAGATGATGGGTTTACATCCCATGAGTTGATGAACTCTGCGAAAGCCTTATTTGAACAACCCATGGTTCTGGATGAACTTTTGAACAAATGA 2349 40.06 MHTLLICEKYSSQSASLFPGLDVGTKTKTGALRFEETKERIKKLFKNVELSISAYDTAWVAMVPSPNSLNKPLFPECINWVLDHQNPDGSWGILHDHQLVMKATLLSTLACVLTLKRWDIGDHHMSKALSFIKSNIASATDENQRSPVGFDIIFPGMIEYAKDLNLNLPLASMNVDALVQKKELELRSCCSNSEGGKAYLAYVSEGIGKLQDWEMVMRYQRKNGSLFSSPSTTAVAFMHRNDDGCFNYLRSVLQKFHSSVPAIYPLDIYARLHMVDSLQKLGIDRHFKDEIRSVLDETYSCWMQGEENIFLDASTCALAFRMLRVEGYDVSSDQLTQFSEGLFSNCLRGHLKDFGASLELFKASQIIIYPDEFILENINSWTSRFLNHGISGGLVRSDRTERLVKQEAVNAFEFPYNSTLERLSNKRALESYSGDIVRISKTTYACLNFGHQDFLELAVEDFNTLQCIHRKELKELEKWVIENKLDKLKFARQKLAYCYFSAAATLTSPELCDARLSWAKNGVLTTVVDDFFDVGGSEEELVNLIQLVEKWDASGETGYCSKEVEIIFLALHSTTCEIGKKALPWQGRSVMRNVIDIWLALLESMRKEAEWLKNKVVPSLDEYMENGYVSFALGPIVLPTLYFVGPKLPEEIVGNCEYKKLFKLMSTSGRLLNDTRTYDRESSEGKLNTLSLYMISAGGKLTKEEATEAMKGDVDRTRRELLRLVLQENSTIPRACKDLFWKMSCVVHLFYRKDDGFTSHELMNSAKALFEQPMVLDELLNK* 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7424717 7429378 + Chy1G008460.1 Chy01g00846 218027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00846 782 Gene3D - 51 253 - -
Chy01g00846 782 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 54 238 IPR008930 -
Chy01g00846 782 Pfam Terpene synthase family, metal binding domain 455 719 IPR005630 GO:0000287|GO:0010333|GO:0016829
Chy01g00846 782 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 222 434 IPR008930 -
Chy01g00846 782 SUPERFAMILY Terpenoid synthases 452 773 IPR008949 -
Chy01g00846 782 CDD Terpene_cyclase_plant_C1 264 772 IPR044814 GO:0010333|GO:0016102
Chy01g00846 782 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 44 772 - -
Chy01g00846 782 Pfam Terpene synthase, N-terminal domain 212 394 IPR001906 GO:0010333|GO:0016829
Chy01g00846 782 Gene3D - 46 462 IPR036965 GO:0010333|GO:0016829
Chy01g00846 782 Gene3D Farnesyl Diphosphate Synthase 465 780 IPR008949 -
Chy01g00846 782 PANTHER ENT-KAUR-16-ENE SYNTHASE, CHLOROPLASTIC 44 772 - -
Chy01g00846 782 SFLD Terpene Cyclase Like 1 N-term 23 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00846 Chy-Chr1:7424717 Chy11g00070 Chy-Chr11:764185 1.54E-42 dispersed
Chy01g00846 Chy-Chr1:7424717 Chy12g01007 Chy-Chr12:15326762 8.98E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00846 K04121 - csv:101217426 1509.2