Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00847 ATGGCCATGGAGGACGGCTTTGCAGCTGAAAAGCTCTTCAATCAGGGATTTTCCTACACCTACGACGATGTCATCTTCCTTCCTCACTACATTGACTTCCCCACTGACTCTGTCCAACTTGCTACCCGACTCACCCGCAATATCTCTCTCTCCATTCCATGCGTTTCTTCCCCCATGGACACCGTCACCGAAGCCTACATGGCTTCTGCCATGGCTGCTCTTGGCGGCATCGGTATCATCCACTCCAATTCCCCTGCCTGCCAACAAGCTGCCATGGTTCATGCCGCCAAGGCCCGCCGAGTTCCTATTTTGTCCAATCTTGTTTTCAAGTCCCCATCCGATCGGATTGACTCCGATGACGATTTTGCTTCTTCGCCCTTCATTTTAGTTACTGAGTCGGGCACCTCTAAGTCCAAGCTTTTGGGCTATGTCTCGTACGCGGATTGGACTTCCCAGGGGAACAAGGAAGTAAAAATATATGATTATATGGTTAATTCGGGGGCTTCAGTTCCGTGGAACTATGATTTAGGGCAATTGGACGCGTTTTTGGAGGAAAACAAGAAGGACTTTGTGCCGCTGTTGAAGGACGGCGAAGTTGTGGATGTTGCGACAAAGTCGGAAGTAGAGAGAATCAAGAGTTATCCAAAACTGGGTGTTGGGTCGGTTGCGGCCGATGGTTCCTGGCTGGTGGGGGCTTCGATTGGAACAAGGGAACATGACAAGGAAAGGCTCAAGCTTTTAGTGCAGGCAGGTATAAACGTAGTGGTGTTGGATAGTTCACAGGGTAACTCCAGTTATCAGATTGATATGATAAAGTATGTGAAGCGGACATATCCAGAGTTGGACGTGATTGGGGGAAATGTGGTGACGATGGCACAAGCCCAGAATTTGATTCAAGCTGGAGTCGATGGCTTGCGGATTGGGATGGGTTCTGGATCTATCTGTACTACTCAGGAGGTTTGTGCGGTTGGACGAGGACAGGCGACAGCGGTTTACAAGGTCTCTTTAGTTGCTTCGCACAGTGGCGTGCCAGTTATCGCTGATGGTGGAATTTCAAACTCTGGGCATATTGTTAAGGCTTTAGTTCTTGGGGCATCCACGGTAATGATGGGAAGTTTCTTGGCTGGAAGTACCGAGGCCCCTGGCACCTTCGAAACGAAGAATGGTCAGCGTGTAAAGAAATATCGGGGGATGGGATCTTTAGAAGCAATGATCAAAGGAAGTGATGCCAGGTACTTGGGGGATACTGCAACCCTTAAGATAGCTCAGGGGGTTGTTGGAGCAGTTGCTGATAAGGGTTCAGTTTTGAAGTTCATACCCTATACCATGCAAGCAGTCAAGCAAGGGTTCCAAGATCTTGGTGCTTCTTCCATCAAATCTGCCCATGACCTCTTAAGCTCAAAGGTTTTAAGGCTAGAGGTCCGTTCAGGGGCGGCACAGGTTGAAGGTGGAGTTCATGGATTGGTCTCTTATGAAAAGAGATCTTTTTAG 1491 48.89 MAMEDGFAAEKLFNQGFSYTYDDVIFLPHYIDFPTDSVQLATRLTRNISLSIPCVSSPMDTVTEAYMASAMAALGGIGIIHSNSPACQQAAMVHAAKARRVPILSNLVFKSPSDRIDSDDDFASSPFILVTESGTSKSKLLGYVSYADWTSQGNKEVKIYDYMVNSGASVPWNYDLGQLDAFLEENKKDFVPLLKDGEVVDVATKSEVERIKSYPKLGVGSVAADGSWLVGASIGTREHDKERLKLLVQAGINVVVLDSSQGNSSYQIDMIKYVKRTYPELDVIGGNVVTMAQAQNLIQAGVDGLRIGMGSGSICTTQEVCAVGRGQATAVYKVSLVASHSGVPVIADGGISNSGHIVKALVLGASTVMMGSFLAGSTEAPGTFETKNGQRVKKYRGMGSLEAMIKGSDARYLGDTATLKIAQGVVGAVADKGSVLKFIPYTMQAVKQGFQDLGASSIKSAHDLLSSKVLRLEVRSGAAQVEGGVHGLVSYEKRSF* 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7431108 7433502 - Chy1G008470.1 Chy01g00847 218028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00847 496 PIRSF IMPDH 6 496 IPR005990 GO:0003938|GO:0006164
Chy01g00847 496 CDD IMPDH 18 463 IPR001093 GO:0003824
Chy01g00847 496 SUPERFAMILY CBS-domain pair 128 209 IPR046342 -
Chy01g00847 496 Gene3D Aldolase class I 6 496 IPR013785 -
Chy01g00847 496 PANTHER INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED 3 496 IPR005990 GO:0003938|GO:0006164
Chy01g00847 496 Hamap Inosine-5'-monophosphate dehydrogenase [guaB]. 18 494 IPR005990 GO:0003938|GO:0006164
Chy01g00847 496 Pfam IMP dehydrogenase / GMP reductase domain 19 486 IPR001093 GO:0003824
Chy01g00847 496 ProSitePatterns IMP dehydrogenase / GMP reductase signature. 305 317 IPR015875 GO:0016491
Chy01g00847 496 SMART IMPDH_2 17 486 - -
Chy01g00847 496 PANTHER INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE 1 3 496 - -
Chy01g00847 496 SUPERFAMILY Inosine monophosphate dehydrogenase (IMPDH) 9 495 - -
Chy01g00847 496 TIGRFAM IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 18 462 IPR005990 GO:0003938|GO:0006164
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00847 Chy-Chr1:7431108 Chy04g02205 Chy-Chr4:26977805 5.93E-25 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00847 K00088 - csv:101217193 957.592