Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00859 ATGTCTCAATCAGTAGAGGACACGAGTCTCGACCTCATCTTTAATGGGTTACTGCTTGGGGGCAACGCCCCTCTTAAGGGACCTAACAATACTGACCCAACACAAGCTATTCTTATGGCTACCAAAAAGAGCGTCGGTACTCTCAAGGAGGCTGATTTGAAGGGAAAGAGGGTGTTCGTTAGGGTCGATCTCAACGTTCCCTTGGATGACAATTTCAACATCACCGATGACACCAGAATCCGTGCCGCTGTCCCTACCATTCAATATTTGATCAGCCATGGCGCTAGGGTCATCCTCTCCAGCCATTTGGGACGTCCAAAGGGTGTAACACCAAAATACAGCTTGAAGCCTCTTGTTCCCAGGCTTTCTGAGCTTCTTGGACTTCAGGTTGTAATGGCTAATGATTGTATTGGCGAGGAAGTTGAGAAGATGGTCGCTGAATTGCCCGAGGGAGGTGTATTGCTGCTTGAAAACGTGAGGTTTTACAAGGAGGAAGAGAAGAATGACCCCGAGTTTGCCAAGAAGTTGGCTTCTCTTGCAGATCTCTATGTTAACGATGCCTTTGGAACTGCTCACAGGGCCCACGCTTCCACTGAGGGTGTGGCTAAGTACTTGAAACCTTCTGTTGCTGGTTTCCTCATGCAGAAGGAACTTGACTACTTGGTCGGAGCTGTGTCTAATCCTAAGAGACCATTTGCTGCAATTGTTGGTGGTTCAAAGGTGTCTTCAAAGATTGGAGTGATTGAATCCTTGTTGGAAAAGGTTAATCTTCTTGTCCTTGGTGGAGGAATGATCTTTACCTTCTACAAGGCACAAGGACTTGCAGTGGGTAAATCACTTGTGGAAGAAGACAAGCTTGACCTTGCTACCTCGCTCATTGAGAAGGCAAAAGCCAAGGGTGTTTCTCTTTTGCTTCCAACCGACGTAGTGGTAGCAGATAAATTTGCTGCTGATGCTGACAGCAAGGTTGTGGCAGCATCAAGTATTCCAGATGGCTGGATGGGTTTGGATATTGGACCTGATTCTATCAAGAGTTTTGGTGAAGCTTTGGATTCTACCCAAACCATTATTTGGAATGGACCTATGGGAGTGTTCGAGTTTGAAAAGTTTGCGGCCGGAACAGAGGCTATTGCCAAGAAGTTGGCAGAGCTGAGTGGAAAGGGAGTTACCACCATAATTGGAGGAGGCGACTCTGTTGCGGCTGTTGAGAAGGTTGGACTTGCGGATAAGATGAGCCACATCTCCACTGGTGGTGGTGCCAGCTTAGAGCTTCTTGAGGGAAAAACGCTTCCCGGCGTCCTTGCTCTTGACGATGCTTGA 1320 47.65 MSQSVEDTSLDLIFNGLLLGGNAPLKGPNNTDPTQAILMATKKSVGTLKEADLKGKRVFVRVDLNVPLDDNFNITDDTRIRAAVPTIQYLISHGARVILSSHLGRPKGVTPKYSLKPLVPRLSELLGLQVVMANDCIGEEVEKMVAELPEGGVLLLENVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPSVAGFLMQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKVNLLVLGGGMIFTFYKAQGLAVGKSLVEEDKLDLATSLIEKAKAKGVSLLLPTDVVVADKFAADADSKVVAASSIPDGWMGLDIGPDSIKSFGEALDSTQTIIWNGPMGVFEFEKFAAGTEAIAKKLAELSGKGVTTIIGGGDSVAAVEKVGLADKMSHISTGGGASLELLEGKTLPGVLALDDA* 440
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7557415 7562376 - Chy1G008590.1 Chy01g00859 218040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00859 439 CDD Phosphoglycerate_kinase 48 438 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 355 380 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 414 431 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 391 402 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 74 96 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 151 166 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 210 232 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 179 201 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 233 252 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PRINTS Phosphoglycerate kinase family signature 52 68 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PIRSF Pgk 40 439 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 Hamap Phosphoglycerate kinase [pgk]. 47 438 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 PANTHER PHOSPHOGLYCERATE KINASE 39 439 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 SUPERFAMILY Phosphoglycerate kinase 46 438 IPR036043 GO:0004618|GO:0006096
Chy01g00859 439 PANTHER PHOSPHOGLYCERATE KINASE, CYTOSOLIC 39 439 - -
Chy01g00859 439 Gene3D - 225 438 IPR015824 GO:0004618|GO:0006096
Chy01g00859 439 Gene3D - 46 222 IPR015824 GO:0004618|GO:0006096
Chy01g00859 439 Pfam Phosphoglycerate kinase 49 428 IPR001576 GO:0004618|GO:0006096
Chy01g00859 439 ProSitePatterns Phosphoglycerate kinase signature. 57 67 IPR015911 GO:0004618|GO:0006096
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00859 Chy-Chr1:7557415 Chy04g02053 Chy-Chr4:26077863 7.96E-51 dispersed
Chy01g00859 Chy-Chr1:7557415 Chy11g01040 Chy-Chr11:14878150 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00859 K00927 - csv:101215513 748.429