Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00870 ATGGATGGGATGCATTTATATAGGGAGGGGTTTGCATATGAATTGGGTTACTCTCTCACCACTCAAGGAGACTTTATTTCTGCCTTGGCTATGAGGACGAAACGTAACGAGAAACACAAGGTAATTCTACCGCCGGATCTTCCACCAGAGCTTACCGAGGAAGAAATTGAGGTTTCCGATGAGGACTTGGAGTTTGTTAAGAAGAACCAAGACTATGCCGCATCTGTTTTCCGTCTAGACACTAAATCCATAACCAAGCATGTTAAGCGGGTTGCTAATGTTGATGAAGATGCTTTGGAGGTTTTATACGAGAAGCGTCTGCGCAAGAAGCCAGTGGAGAAACAGGAGGAGGGAAATGAGCTCCAAGTTGATCCTGTGGACGCTCTTCCTGTCAAAACACTCGATGGGAAACTCTACTACCGGAGATCAAAACTATCCGATGCACCTGAAAATGGTGGGAATGAGGAGACAATGGAAGAAGACCAGGTAGATAATGGTGTATTGAAGTTAACTAAGGCAGAAAGGAGAGCAAAGCAAAAGAAAATTAAGAAGATTGCCAAGAAACAAGAGGATGTAACTCAAGCTGAAGAAGTTCAACCAACCTCACAAGCTGCTGTTTTGGCCGAAGTGGTAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGGGTTGCTAGCAGACCCAAATTCCAATATTAAATCTCTGAAGGAGATGCTGCAGATTGCTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTAGAAATTAAAGTGTCCAAGGATGTCAAGAAAATGCGATACTATGAGTCTACTCTTCTTACTGTTTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAAAAATTGCCATCATTTCAGCATGTTGTTATTCGCTGTATATGTACATTGCTTGATGCAGTTCCCCATTTCAACTTTCGAGAGACATTGTTAGCAGTCGTCGTTAAAAACATAAGCTCCTCTGATGACATTGTAAGAAAACTTTGTTGTGGTGCAATTCAATCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCAACCGTGGAGGCTGTCCGGTTGATTGCTGATCATGTGAAATATCATGACTGCCAATTGCATCCTGATTCCATCCAGCCTTTTGTACATCTAATGTTTGACGAGGATCTGAGGAAAGCAGAAAAGCAAGATGAGCATAGTAAGGTAAAGAACAAAAAATACAGGAAAATAAAGAATCGTGAGGAACCGAGTCAGCAAGGGAATGATGGAAGACAGAGTACGAGGACGAAGTTTACTGAAGAGGTTGTTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCAGATACACTTTCTGCTGTATTTGAAACATATTTCCGAATCTTAAGGCATACAATGCAGTCATTAACTTCTGGGCCTGAAGCAAGTAGTGCTCCATCCACAACTAGCGCATCTGCATCCCATCCTCTGCTTGTTCCATGTTTGAATGGGTTGGGAAAATTCTCGCATCTCATTGATATGGATTTCATGGGAGATCTTATGAATTATTTAAAAAGGCTTGCTTCTGGTGGGGACCATTCTTCTGAGAAACAGTCGCGATGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAATCTTGATGCTTTGAATGTTGATCTTCAGGATTTCTTTGTCCAGCTATACAATATTGTACTTGATTACAGGCCTGGAAGGGATCAAGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGTTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTAACCGTAAGGCATCTTCTTCTGAAAAATGTCAAGTGCCGGAACCTTTTGGAAAACGACGCTGGTGGAGGTTCAGTGTCAGGCTCTATAGCGAAATATCAGCCATATGCAACTGATCCAAATTTGAGTGGCGCTCTTGCTTCAGTTCTTTGGGAAGTTGATCTTCTTTGTAAGCATTATCATCCAGCTGTCTCAACGATGGCTGCTGGCATATCGAACATGAATAGTGCTCAAAATCAAGTATATATCTCCACTGTTTCTCCCCAACAAGCATTCAAAGACTTGTCGCTGGAACAAGAGTCCTTCAACCCACAATTTAACACCAGAAAAATTAACAAGAGAAAAAGAGCTTCAGAATCTTCCCAGTCTACTCTCAATACGTGTGGCACTATCGACGAAAATGAAGTGAAGGAAAAACTGTCATCAAGATTCTTTCTTCTCCGGGACATCAAGGACAATGAAAGGTTGAGATCTGAATTAAACCGCACCACTTTGTGTTGGCAGCTATACGAAGAATACAAAAGGCAAAAGAGAAAAATTAAAAAGTCTAGGAATGTTTAG 2568 41.36 MDGMHLYREGFAYELGYSLTTQGDFISALAMRTKRNEKHKVILPPDLPPELTEEEIEVSDEDLEFVKKNQDYAASVFRLDTKSITKHVKRVANVDEDALEVLYEKRLRKKPVEKQEEGNELQVDPVDALPVKTLDGKLYYRRSKLSDAPENGGNEETMEEDQVDNGVLKLTKAERRAKQKKIKKIAKKQEDVTQAEEVQPTSQAAVLAEVVEDLTAEKTFESKKQKLAELGIGLLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEIKVSKDVKKMRYYESTLLTVYKGYLQKLMSLEKLPSFQHVVIRCICTLLDAVPHFNFRETLLAVVVKNISSSDDIVRKLCCGAIQSLFINEGKHGGEATVEAVRLIADHVKYHDCQLHPDSIQPFVHLMFDEDLRKAEKQDEHSKVKNKKYRKIKNREEPSQQGNDGRQSTRTKFTEEVVADYRAASLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLTSGPEASSAPSTTSASASHPLLVPCLNGLGKFSHLIDMDFMGDLMNYLKRLASGGDHSSEKQSRCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLDYRPGRDQGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVRHLLLKNVKCRNLLENDAGGGSVSGSIAKYQPYATDPNLSGALASVLWEVDLLCKHYHPAVSTMAAGISNMNSAQNQVYISTVSPQQAFKDLSLEQESFNPQFNTRKINKRKRASESSQSTLNTCGTIDENEVKEKLSSRFFLLRDIKDNERLRSELNRTTLCWQLYEEYKRQKRKIKKSRNV* 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7736151 7745130 + Chy1G008700.1 Chy01g00870 218051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00870 855 MobiDBLite consensus disorder prediction 427 451 - -
Chy01g00870 855 Pfam Nucleolar complex-associated protein 223 313 IPR011501 -
Chy01g00870 855 MobiDBLite consensus disorder prediction 427 463 - -
Chy01g00870 855 Pfam CBF/Mak21 family 582 737 IPR005612 -
Chy01g00870 855 Coils Coil 170 198 - -
Chy01g00870 855 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 36 796 IPR016903 -
Chy01g00870 855 SUPERFAMILY ARM repeat 244 622 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00870 K14834 - csv:101213821 1503.42