Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g00888 | ATGTCAAATGATGAAGGGAAAAATGTGTACCAGCAGTATGATCCATTTCAATACAACCAATTGGATATGAACCGTTCAATCTTCCATCAACAAGCTGCAGCGGCGTTGGATCCTGGGCTGATGAGTTTCACTAATTTCTTCGATACCAGCACTTTGGAATATAATAGCCTGACGAAGGCGTTCGATGTGTCGTGCTGTTCATCTCAAGTCATTTCTGCAGTGGACGACGTGTCGAAAAAGAAGGCTTCAACGACAACCCCAAATTCTTCAGTGTCATCTTCGTCTAATGAAGCTGTAGTTGAAGAAGATTCAGTGAAGAGCAACAAATTAGAAGACATAAAAGGGCGGTGCGAGAATAAAGATGAAGAAAAATCTAAGAAACAGAACAGCAATTTATCAAAAAAGAAAGAGAAACGGCCGAGGGAGCCCCGTTTTGCTTTCTTGACTAAGAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGTCAGAAAGCAGTTAAAAATAGTCCTTACCCCAGAAGCTACTATAGATGCACCAGCCAAAAATGTGTAGTAAAAAAACGAGTTGAAAGATCATATCAAGATCCATCTGTGGTGATTACTACATATGAAGGCCAACACAACCACCATTGCCCAGCTACACTCCGAGGCCATTCTGCAGGGATCATGTCGTCTCCATTCTACGCACCAGCATCAACATCAGTAACAGCAGCCTCATCGGGGCCTACGCTTCCCCAAGAACTCTTCTCGCATTTGTTACCAACGAATAACTGCCAAACCGACCCAGCTGCCTCGATGATGTACCAAAATCTAAGCCTTCAACAACACCTTCAAATGCCTGATCATTATGGTTTGTTGCAAGATTTATTCACTCAAAAATAG | 894 | 42.17 | MSNDEGKNVYQQYDPFQYNQLDMNRSIFHQQAAAALDPGLMSFTNFFDTSTLEYNSLTKAFDVSCCSSQVISAVDDVSKKKASTTTPNSSVSSSSNEAVVEEDSVKSNKLEDIKGRCENKDEEKSKKQNSNLSKKKEKRPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYAPASTSVTAASSGPTLPQELFSHLLPTNNCQTDPAASMMYQNLSLQQHLQMPDHYGLLQDLFTQK* | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8099252 | 8101484 | - | Chy1G008880.1 | Chy01g00888 | 218069 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g00888 | 297 | MobiDBLite | consensus disorder prediction | 77 | 101 | - | - | |
Chy01g00888 | 297 | ProSiteProfiles | WRKY domain profile. | 151 | 216 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00888 | 297 | MobiDBLite | consensus disorder prediction | 102 | 146 | - | - | |
Chy01g00888 | 297 | Gene3D | WRKY domain | 141 | 217 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00888 | 297 | SUPERFAMILY | WRKY DNA-binding domain | 149 | 216 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00888 | 297 | PANTHER | WRKY TRANSCRIPTION FACTOR 71-RELATED | 16 | 295 | - | - | |
Chy01g00888 | 297 | MobiDBLite | consensus disorder prediction | 77 | 146 | - | - | |
Chy01g00888 | 297 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 16 | 295 | IPR044810 | GO:0003700 | |
Chy01g00888 | 297 | Pfam | WRKY DNA -binding domain | 157 | 213 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy01g00888 | 297 | SMART | WRKY_cls | 156 | 215 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g00888 | Chy-Chr1:8099252 | Chy02g00170 | Chy-Chr2:1195290 | 4.17E-58 | dispersed | |
Chy03g00701 | Chy-Chr3:9543590 | Chy01g00888 | Chy-Chr1:8099252 | 7.69E-46 | transposed | |
Chy01g00888 | Chy-Chr1:8099252 | Chy11g01009 | Chy-Chr11:14264192 | 2.99E-51 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17309 | PF03106 | WRKY | 5.60E-25 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g00888 | - | - | csv:101211248 | 552.362 |