Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g00898 ATGAATGGTGCCACAGTAACAAATTCTGAACCAGACAACAACTCTGAATATGTTGAAGTTGATCCCACCGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGGGCATCGAAGACAGTTTACAGAGCTTTCGATGAATACGATGGCATTGAAGTGGCATGGAATCAAGTGAAGCTTAGTGATTTTCTTCAAACTCCTGAAGATCTTGAAAGGCTGTACAGAGAAATCCATTTGTTGAAAACATTAAAACACAACAACATAATGAAATTTTATTCTTCTTGGGTTGACACTGCTAATAGAAACATTAACTTTGTTACAGAGATGTTCACTTCTGGGACTCTTAGACAATATAGGTTGAAGCATAAGAAAGTGAATATCAGAGCTGTGAAGCATTGGTGTAGACAGATTTTAAAAGGGCTTCTCTATCTTCACAGCCATGATCCTCCTGTAATCCATAGAGACCTTAAATGTGATAATATTTTTGTAAATGGGAATCAAGGGGAAGTCAAAATTGGTGATCTTGGTCTTGCTGCTATTCTTCGTAAATCTTATGTAGCTCAATGTGTTGGAACACCAGAGTTTATGGCTCCAGAGATTTATGAAGAAGAGTATAATGAATTGGTTGATATATATTCTTTTGGAATGTGCATATTAGAGATGGTTACTTTTGAATATCCATACAGTGAATGCACCCACCCTGCTCAGATTTACAAGAAAGTTATCTCTGGGAAGAAACCAGATGCTTTGTATAAGGTAAAGGATCCCGAGGTTCGGTGTTTCGTCGAGAAATGCTTGGCTACTGTGTCAACTAGGCTGTCAGCTAGGGAGCTTTTGAATGACCCTTTTCTTCAAATTGATGGTTGTGATTCTTTATTGAGGCCAATAGAGTACTATGCAGAATATGATGAAGTGAACAATTCCCTTATCAGAGGAGGGCCTTTTTATGGAATTTCTCATGGTCGTTTGGATAATGGGTATGCGAATTATTTTAGTCATGAGGCTGGGAATGGCTTGGATTACTGTCACATTGATAACGAAGCGAGCGAAATCGATCTTTTCTCCTGTCAAGAGGATGAGCATTTGGAAGATGTTGATATCACTATTAAAGGGAGAAGAAGAGGCGACGATGATATCTTTCTACGACTTCGGATTGTAGATAAAGAAGGTCGAATTCGAAACATCTACTTTCCCTTTGATTTAGAGAACGATAGTGCTTTGAGTGTTGCTAATGAGATGGTTTCTGAGCTTGACATTACTGATCAAGATGTGAAGAAGATTGCTGATATGATAGATGGTGAGATTGCTACATTGGTACCAGAGTGGAAGAAGGGAAAAAGTTTAGAGAAAACTCCAAACTGCAGTGATTCTAATGTTTGTCACAATTGTGCTTTGAACAGTTCTCTTTTGGATTACGTTTCGCCACATAATCTTGCGAAGAAGAACCTGCACATTCTTCAGTGTTCTGAAGAGCATGGTTGTGCTTCTATCCATGGACGATTTGAAGAGATTACATACCAAGTTGAGGGGTCGGAACAATTTAATGGAGACGAAAACTTGCATAGAACAACAGAAAATTCAAGTGATATCCATTATGCCGATATTTGGGCGCAACGAGATGGACCAGATGTAGTTTCTCAAGAATCTTTAGAAGCTTGCAATGAATTTGGAGCATCGGAACAGCCAAAACTCGAGAAGGAAGAAAGTGATGTAAATATGGATGATAATGATCATCAAATGGAATTCCAAACAAGAAACTCTAGCTCATCAAATCCTTCGGCGTCCTTTGTCGATGATCATGAGAACGAAATTCGACAAGAACTTAGATGGCTCAAGGCTAAATATCAAATGCAGTTAAGAGAGCTAAGAGATCAACAATTAGGAGTCAAGACCAAATCTCTTAGCTTGCACCCAATTTCCAACCTCACCGAGGCCGATAACGGAGCTTCGGTATCTTTGCTTTCGCCAAACTTCAATGAAGCAGCAAAAAATAATACTGTCCAAACATCTCTCTCCTTTGGCAAGAATATCACTTCACATTCCCCCTATGGTGCTGCTGATAACATTTTGGAGAACAAAACCTTTCAAGACAGCAATGTCATTGTTGACGAGTTGAGTAGTCCCGAGCTGATTGTTACGGCCAAGAGTTTCTATACAGGAGCATTGTTTCCACATTCTCTTCAAAGAGCAACCTCACTTCCCGTTGATGCTATAGACTTTTAG 2223 39.23 MNGATVTNSEPDNNSEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGIEVAWNQVKLSDFLQTPEDLERLYREIHLLKTLKHNNIMKFYSSWVDTANRNINFVTEMFTSGTLRQYRLKHKKVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSYVAQCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRCFVEKCLATVSTRLSARELLNDPFLQIDGCDSLLRPIEYYAEYDEVNNSLIRGGPFYGISHGRLDNGYANYFSHEAGNGLDYCHIDNEASEIDLFSCQEDEHLEDVDITIKGRRRGDDDIFLRLRIVDKEGRIRNIYFPFDLENDSALSVANEMVSELDITDQDVKKIADMIDGEIATLVPEWKKGKSLEKTPNCSDSNVCHNCALNSSLLDYVSPHNLAKKNLHILQCSEEHGCASIHGRFEEITYQVEGSEQFNGDENLHRTTENSSDIHYADIWAQRDGPDVVSQESLEACNEFGASEQPKLEKEESDVNMDDNDHQMEFQTRNSSSSNPSASFVDDHENEIRQELRWLKAKYQMQLRELRDQQLGVKTKSLSLHPISNLTEADNGASVSLLSPNFNEAAKNNTVQTSLSFGKNITSHSPYGAADNILENKTFQDSNVIVDELSSPELIVTAKSFYTGALFPHSLQRATSLPVDAIDF* 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8326670 8329447 + Chy1G008980.1 Chy01g00898 218079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g00898 740 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 2 729 - -
Chy01g00898 740 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 380 434 IPR024678 GO:0004674|GO:0005524
Chy01g00898 740 Gene3D - 378 467 - -
Chy01g00898 740 CDD STKc_WNK 25 284 - -
Chy01g00898 740 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00898 740 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 729 - -
Chy01g00898 740 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Chy01g00898 740 Coils Coil 605 625 - -
Chy01g00898 740 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Chy01g00898 740 SMART serkin_6 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00898 740 ProSiteProfiles Protein kinase domain profile. 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g00898 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Chy01g00898 740 SUPERFAMILY Protein kinase-like (PK-like) 21 285 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00898 Chy-Chr1:8326670 Chy05g01179 Chy-Chr5:16269268 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70986 PF00069 Pkinase 1.70E-50 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g00898 K08867 - csv:101210511 1461.43