Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01074 ATGTGTAAGAAGGACCATGTTTCTTGCATAGAAACATTTCAAAGTGGACGTCATCTGCAGCTGAGATGGGTTGTTATTGGAGATGAGAATACTTTTAGTATGGAAGTGAGGATTTTATTGAAGATCATTTTCCGTTCTGAGGGTTCCAAGAAATTATTTCAAGTTAAAAAGAAGCAGTTCTTCCATAACTTCTTGACCATTATGCTGTTTGGGGTGATTGGTGTTTTTATATCTGCATCTATTATAACCGCTGGCAGCCAGTGGCTGTTTCCCAGAATGGGCTTCCATGGTCTGTCAGCACGGGACTATGTTGCTATAGGCGCTATTTTTTCATCCACAGACACAGTATGCACCCTGCAGGTATTGCACCAAGAGGAAACACCTTTACTCTACAGCCTAGTCTTTGGGGAAGGAGTAGTGAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTCCAGAAGATTGATATCAGTAGGCTTAACAGCAAGACAGCCCTCCATCTTTTGGGAGATTTTTGTTACTTATTTTCAACTAGCACCGTCCTTGGATTGACCACTGGGCTTCTAACATCATATATCCTGAAAACCTTATATTTTGGGAGACATTCAAGTGTGCGTGAGCTTGCAATAATGGTTTTAATGGCCTACCTATCGTACATGCTAGCAGAGTTACTGGAGTTGAGTGGAATACTCACAGTTTTCTTTTGTGGGATTATCATGTCGCACTATGCATGGCATAATGTGACTGATAGTTCAAGAATTACCACCAGGCATGTATTTGCAATGATGTCGTTCGTTGCTGAAACTGCAATATTTCTTTATGTGGGCATGGATGCTCTTGACATTGAGAAGTGGAAGATAACTAAATTAAGCTTGTGGAAGTTGCTTGGCACATACACCATCATAGTTCTTTTGGTATTGGTTGGTCGTGCGGCCTTTGTATTTCCTCTATCTGCTGTATCTAATTACTTCATTAAACGTGAAGATAGATCGTCATCGCCTTCTATGATCTCATTTAAACAACAGATCATTATATGGTGGGCTGGATTGATGAGAGGAGCTGTATCCATTGCTCTGGCTTTTAAACAGTTCACATATTCCGGGGTTACAGTGGATCCAACCCATGCAACAATGATTACCAACACCACAATTGTTGTACTCTTCACGACAGTGGTATTTGGATTTCTAACGAAGCCACTCATAAGGTGTCTACTTCCTCCCAACCAAGCAAGTAGCAGTACAAGCAACTCGAGACCAAAGTTCACTGAAGAGGACATAACTCTCCCTTTGCTTTCCATGGAAGAGTCTGCTGCGACCAATGTCCTCCGCGCAAAGGATAGTTTGTCGATGTTAATAGAGAGGCCTGTTTACACCATACATTACTTTTGGAGGAAATTTGATGATTCCTACATGAGACCTTTATTTGGAGGGCCTCGCCACAACCAACGACCGGGCGGATCTGGTTGTTAA 1470 41.9 MCKKDHVSCIETFQSGRHLQLRWVVIGDENTFSMEVRILLKIIFRSEGSKKLFQVKKKQFFHNFLTIMLFGVIGVFISASIITAGSQWLFPRMGFHGLSARDYVAIGAIFSSTDTVCTLQVLHQEETPLLYSLVFGEGVVNDATSVVLFNAVQKIDISRLNSKTALHLLGDFCYLFSTSTVLGLTTGLLTSYILKTLYFGRHSSVRELAIMVLMAYLSYMLAELLELSGILTVFFCGIIMSHYAWHNVTDSSRITTRHVFAMMSFVAETAIFLYVGMDALDIEKWKITKLSLWKLLGTYTIIVLLVLVGRAAFVFPLSAVSNYFIKREDRSSSPSMISFKQQIIIWWAGLMRGAVSIALAFKQFTYSGVTVDPTHATMITNTTIVVLFTTVVFGFLTKPLIRCLLPPNQASSSTSNSRPKFTEEDITLPLLSMEESAATNVLRAKDSLSMLIERPVYTIHYFWRKFDDSYMRPLFGGPRHNQRPGGSGC* 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12076630 12082928 - Chy1G010740.1 Chy01g01074 218255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01074 489 Pfam Sodium/hydrogen exchanger family 55 402 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy01g01074 489 Gene3D - 99 151 - -
Chy01g01074 489 PANTHER SODIUM/HYDROGEN EXCHANGER 39 482 IPR018422 GO:0006812|GO:0015299|GO:0016021
Chy01g01074 489 PANTHER SODIUM/HYDROGEN EXCHANGER 39 482 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01074 Chy-Chr1:12076630 Chy02g01126 Chy-Chr2:7962646 3.89E-176 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01074 - - csv:101217775 833.558