Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01075 ATGGCAAACTCTGAGTGGTTATTGGCTTCTGTTAGGTATCGGAGATTGAATTTAGGTTTTTTTTTTGCTTTTGCTTTTGCTTTTGCAGGAGATGCTCCACTTGTTGTGGCTCGCGGTGGATTTTCAGGGCTGTTTCCAGATTCAAGTGGAGTTGCCTACAATTTTGCAGCTATTGTTAGTGTTCCTGATGTGATCTTATGGTGCGATGTGCAATTAACCAAAGATGGAGTTGGAATATGTCTCCCGGATCTGAGGCTTGACAATGCAACTGATGCTTCGGCTATTCTGGGGACAAAACGCACCCGTTCCTATCCTGTTAATGGTGTCTCTATGAATGGATTGTTTACCGTTGATTATGATTTCAAAGAACTGGAAAATGTTTCTGTTGTTCAAGGTATCTATACTCGATCTACGAAGTTCGATGGCAATCAGTTTATTATTCTTACTCCTGAAGATGTGGCTAATCAGTTCAAGCCACGAGGATTTTGGCTTAATATTCAGCATGATGTGTTCTTCACGCAGCATAACGTGAGCATGAGAAACTTTGTACTTTCTGTAACCAGAAGCATCATTGTTAACTATATATCATCACCAGAGGTGGGATTTCTTAGAAGTATAGCTGCACGAGTTCCCCGCACAACAAAGTTAATCCTTCGGTTCTTAGGACCAACTGATAGAGAGATTACCACCAATCAGACTTATGACTCGCTCAAACAAAATCTCACATTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCCAAGACTTATATATGGCCTACTGAAGATAGTTACTTACAGGCTCAAACCTCTCTTGTTTCTGATGCTCATAAAGCACAGCTGGAAGTTTTTGCATCAGATTTCTATAGTGACATTCCACTACCCTACAACTACAGTTATGATCCCGTTACTGAATACCTGTCTTACTTTGACAATGGTAAATTTTCAGTTGATGGTGTGCTCAGTGATTTCCCTATTACTCCATCGTCAGCTATTGCCTGTTTTGCTCATTTGGGTAAGAATGCCAAAAGTCAAGACAAGCCTTTAGTTATTTCAAAATTTGGAGCTAGTGGAGACTTTCCTGCGTGTACAAATTTGGCTTACACGAATGCTATTTCAGATGGTGTTGAAGTGCTCGACTGTCCTGTTCAAATATCAAAAGATGGAATACCATTTTGCATGAGCTCAATTAATCTCATCGACAGCACAACAATATCTCAATCACCATTTATAAACCGTTCAACAAATATTCCTGAAATTAGTCCTAACGATGGAGTCTTTGCTTTTGACTTAACATGGAATGAGATTAAAAGCCTGACCCCGTCAATATTGAACCCTTATTCGGCGAAGTACACGTTGTTCCGAAACCCAAGGTTCAAAAACAGTGGGGAATTCAGAACACTACCTGATTTCTTGGCCTTGGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCCAAATTGAGAATGCAGCCTACCTTGCTAAGCATGGTTTTAGTGTAACTGATGCGGTCTTATCTTCCTTGAGCGAAGCTGGTTATGATAATCAGACAGCCGTTAAAGTATTGATTCAATCTCCAGATAGCGCTGTTCTAATAAAATTTAAACAGGAAAATAAAAACTACGAGCTTGTTTACAAAGTTGACGCACCAATTAGTGATGTGCTCAATACAACTGTTGAGGACATTAAGAGTTTTGCCGACTCTGTAACTATCACCAAGAGCTCTGTCTTCCCTGTCAATCAGTTCTTTCTCACTGGAGCTACAAATGTTGTGAACAAGCTGAAGGCACTCAATCTCTCTGTATATGTGGAATCCTTCAGCAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCGGATGCAACAGTAGAGATCAATTCATTTGTTTTGGGAGCCGAAATTGATGGAGTCATCACCGACTTTCCAAAGACATCTGCTAGATATAAAAAGAACCGATGTTTAACAATGAAAGAAACACCTACATACATGAGCCCTGTCCAGCCCGGTAGCTTGTTGCAACTTATTACTCAGCCCTACTTGCCTCCGAAAACACCTCCGAGCCCGGTTCTAGATGACAAAGATGTAGCCGAGCCACCATTGCCTCCGGTTTCAGCCAAAGCCCCTCCACCTGCTGGGGAAGGTGGCTCGACAGCAGCACCTCCAACTTCTAAACCCAATGGACAACCTAAGCTTGGAGCTGGAGCAGGCTTATTGCTCTTGAACCTCGCCATACTTTCCATCGCTCTTCTTCCATTCTGA 2262 41.56 MANSEWLLASVRYRRLNLGFFFAFAFAFAGDAPLVVARGGFSGLFPDSSGVAYNFAAIVSVPDVILWCDVQLTKDGVGICLPDLRLDNATDASAILGTKRTRSYPVNGVSMNGLFTVDYDFKELENVSVVQGIYTRSTKFDGNQFIILTPEDVANQFKPRGFWLNIQHDVFFTQHNVSMRNFVLSVTRSIIVNYISSPEVGFLRSIAARVPRTTKLILRFLGPTDREITTNQTYDSLKQNLTFIKTFASGILVPKTYIWPTEDSYLQAQTSLVSDAHKAQLEVFASDFYSDIPLPYNYSYDPVTEYLSYFDNGKFSVDGVLSDFPITPSSAIACFAHLGKNAKSQDKPLVISKFGASGDFPACTNLAYTNAISDGVEVLDCPVQISKDGIPFCMSSINLIDSTTISQSPFINRSTNIPEISPNDGVFAFDLTWNEIKSLTPSILNPYSAKYTLFRNPRFKNSGEFRTLPDFLALAKNASTLSGVLIQIENAAYLAKHGFSVTDAVLSSLSEAGYDNQTAVKVLIQSPDSAVLIKFKQENKNYELVYKVDAPISDVLNTTVEDIKSFADSVTITKSSVFPVNQFFLTGATNVVNKLKALNLSVYVESFSNEFVSQAWDFFSDATVEINSFVLGAEIDGVITDFPKTSARYKKNRCLTMKETPTYMSPVQPGSLLQLITQPYLPPKTPPSPVLDDKDVAEPPLPPVSAKAPPPAGEGGSTAAPPTSKPNGQPKLGAGAGLLLLNLAILSIALLPF* 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12104380 12111200 + Chy1G010750.1 Chy01g01075 218256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01075 753 CDD GDPD_SHV3_repeat_1 33 331 - -
Chy01g01075 753 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 28 726 - -
Chy01g01075 753 Pfam Glycerophosphoryl diester phosphodiesterase family 355 645 IPR030395 GO:0006629|GO:0008081
Chy01g01075 753 Pfam Glycerophosphoryl diester phosphodiesterase family 68 285 IPR030395 GO:0006629|GO:0008081
Chy01g01075 753 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 28 726 - -
Chy01g01075 753 SUPERFAMILY PLC-like phosphodiesterases 346 649 IPR017946 GO:0006629|GO:0008081
Chy01g01075 753 Gene3D Phosphatidylinositol (PI) phosphodiesterase 346 649 IPR017946 GO:0006629|GO:0008081
Chy01g01075 753 Gene3D Phosphatidylinositol (PI) phosphodiesterase 31 330 IPR017946 GO:0006629|GO:0008081
Chy01g01075 753 SUPERFAMILY PLC-like phosphodiesterases 32 328 IPR017946 GO:0006629|GO:0008081
Chy01g01075 753 ProSiteProfiles GP-PDE domain profile. 348 650 IPR030395 GO:0006629|GO:0008081
Chy01g01075 753 ProSiteProfiles GP-PDE domain profile. 33 332 IPR030395 GO:0006629|GO:0008081
Chy01g01075 753 MobiDBLite consensus disorder prediction 684 733 - -
Chy01g01075 753 CDD GDPD_SHV3_repeat_2 348 649 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01075 Chy-Chr1:12104380 Chy02g00671 Chy-Chr2:4070189 0 dispersed
Chy01g01075 Chy-Chr1:12104380 Chy12g01496 Chy-Chr12:18810214 1.39E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01075 - - csv:101216597 1372.45