Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01076 ATGCCTGAGAAAGAGATTCACAATGTTGTTACACAGCCTCGTCTTGTTGTTAGAAAGTTTCTGGCTAGGCCTCAGCATGAAGGCTTGGGCGCCATTGTTCGAAGGAGCATTGGCAGGTTTGAGCTGAAATACTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCAGATCATCCACATAGAGGATTTGAGACTGTGACCTACATGCTGCAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGCGACTTGCAATGGATGACTGCAGGCAGAGGAATTGTACATTCAGAAATGCCTGCAGCCCAAGGTACCCAAAAGGGCCTCCAACTATGGATCAATCTATCTTCCAAGAACAAAATGATTGAGCCAAATTACCAGGAAGTTTCAAGCAAGGGAATTCCAGAAGCTTCAAAAGATGGAGTGGGAGTGAAAGTCATTGCTGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAAGCCAAAAGCTTATGTCCAACAGCCAATCCCGTTGTCTTGGAATGCATTCGTGTACATTCTTGAAGGCGAAGGCGTCTTCGGCAACTCAAAGGCAACATCAACGACAGAGCATAACCTTCTTCTTCTCGGGTACGGGGATGGTTTAGAGGTCTGGAATAAGTCGGGCAAGCCTCTTAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAATTATACGAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGGGATTTCTCTTGGGTTCAATCCTTTTCCCCCGTGA 921 45.39 MPEKEIHNVVTQPRLVVRKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKGIPEASKDGVGVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAYVQQPIPLSWNAFVYILEGEGVFGNSKATSTTEHNLLLLGYGDGLEVWNKSGKPLRFILVGGEPLSEPVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAGISLGFNPFPP* 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12142885 12146173 + Chy1G010760.1 Chy01g01076 218257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01076 306 PANTHER OS09G0484800 PROTEIN 2 297 - -
Chy01g01076 306 Gene3D Jelly Rolls 27 279 IPR014710 -
Chy01g01076 306 PANTHER PIRIN-RELATED 2 297 IPR012093 -
Chy01g01076 306 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Chy01g01076 306 Gene3D Jelly Rolls 148 253 IPR014710 -
Chy01g01076 306 PIRSF Pirin 12 292 IPR012093 -
Chy01g01076 306 Pfam Pirin 34 126 IPR003829 -
Chy01g01076 306 CDD cupin_pirin_C 176 252 - -
Chy01g01076 306 CDD cupin_pirin_N 33 128 - -
Chy01g01076 306 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01076 Chy-Chr1:12142885 Chy07g01410 Chy-Chr7:18629634 2.52E-143 dispersed
Chy01g01076 Chy-Chr1:12142885 Chy06g01869 Chy-Chr6:22566950 1.80E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01076 K06911 - csv:101216351 607.06