Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01076 | ATGCCTGAGAAAGAGATTCACAATGTTGTTACACAGCCTCGTCTTGTTGTTAGAAAGTTTCTGGCTAGGCCTCAGCATGAAGGCTTGGGCGCCATTGTTCGAAGGAGCATTGGCAGGTTTGAGCTGAAATACTTTGACCCTTTTCTGGTTTTGGATGAATTTTCAGTTACTGCCCCAGCTGGGTTCCCAGATCATCCACATAGAGGATTTGAGACTGTGACCTACATGCTGCAGGGAAGTGTGACACATGAAGATTTTGAAGGCCACAAGGGAACAATTGGTGCAGGCGACTTGCAATGGATGACTGCAGGCAGAGGAATTGTACATTCAGAAATGCCTGCAGCCCAAGGTACCCAAAAGGGCCTCCAACTATGGATCAATCTATCTTCCAAGAACAAAATGATTGAGCCAAATTACCAGGAAGTTTCAAGCAAGGGAATTCCAGAAGCTTCAAAAGATGGAGTGGGAGTGAAAGTCATTGCTGGTGAGGCATTGGGAGCAAAATCACCAATCTACACAAGAACTCCAACCATGTACTTGGACTTCACTCTCAAGCCAAAAGCTTATGTCCAACAGCCAATCCCGTTGTCTTGGAATGCATTCGTGTACATTCTTGAAGGCGAAGGCGTCTTCGGCAACTCAAAGGCAACATCAACGACAGAGCATAACCTTCTTCTTCTCGGGTACGGGGATGGTTTAGAGGTCTGGAATAAGTCGGGCAAGCCTCTTAGGTTCATTTTGGTAGGAGGTGAACCATTGAGTGAGCCTGTTGTGCAATTTGGGCCATTTGTGATGAACACTCAAGAAGAAATTGACCAAACAATTGATGATTTTGATAATTATACGAATGGGTTTGAGAAAGCAAGGCATTGGAGATCAGAAGCTGGGATTTCTCTTGGGTTCAATCCTTTTCCCCCGTGA | 921 | 45.39 | MPEKEIHNVVTQPRLVVRKFLARPQHEGLGAIVRRSIGRFELKYFDPFLVLDEFSVTAPAGFPDHPHRGFETVTYMLQGSVTHEDFEGHKGTIGAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLSSKNKMIEPNYQEVSSKGIPEASKDGVGVKVIAGEALGAKSPIYTRTPTMYLDFTLKPKAYVQQPIPLSWNAFVYILEGEGVFGNSKATSTTEHNLLLLGYGDGLEVWNKSGKPLRFILVGGEPLSEPVVQFGPFVMNTQEEIDQTIDDFDNYTNGFEKARHWRSEAGISLGFNPFPP* | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 12142885 | 12146173 | + | Chy1G010760.1 | Chy01g01076 | 218257 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01076 | 306 | PANTHER | OS09G0484800 PROTEIN | 2 | 297 | - | - | |
Chy01g01076 | 306 | Gene3D | Jelly Rolls | 27 | 279 | IPR014710 | - | |
Chy01g01076 | 306 | PANTHER | PIRIN-RELATED | 2 | 297 | IPR012093 | - | |
Chy01g01076 | 306 | Pfam | Pirin C-terminal cupin domain | 179 | 283 | IPR008778 | - | |
Chy01g01076 | 306 | Gene3D | Jelly Rolls | 148 | 253 | IPR014710 | - | |
Chy01g01076 | 306 | PIRSF | Pirin | 12 | 292 | IPR012093 | - | |
Chy01g01076 | 306 | Pfam | Pirin | 34 | 126 | IPR003829 | - | |
Chy01g01076 | 306 | CDD | cupin_pirin_C | 176 | 252 | - | - | |
Chy01g01076 | 306 | CDD | cupin_pirin_N | 33 | 128 | - | - | |
Chy01g01076 | 306 | SUPERFAMILY | RmlC-like cupins | 14 | 293 | IPR011051 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01076 | Chy-Chr1:12142885 | Chy07g01410 | Chy-Chr7:18629634 | 2.52E-143 | dispersed | |
Chy01g01076 | Chy-Chr1:12142885 | Chy06g01869 | Chy-Chr6:22566950 | 1.80E-119 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01076 | K06911 | - | csv:101216351 | 607.06 |