Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01166 ATGCTCCGCTTTCTCTTCCTCCTCCTCCTCTCCTCCGCCGCCGCCCACAGTGGTCACTCCGACGATGATGACTCCGCTTCCGGAGACAGCCCTTCCCCTTCCCCTAACCTCCGCTCCAAACCTCTCATCCTCGTCAAGATCACCTGCCTCATTCTCATCTTCTTCGGTACCTTCATCCCCGGAATCTCCCCCTGTTTCTTCAAATGGAACGACGGCTTCCTCCTCCTCGGCACTCAGTTCGCCGGCGGCGTCTTCTTCGGCACCGCTATGATGCATTTCCTTTCCGATGCTAATGAGACCTTTCGCGATTTGACTGATAACGCCTATCCCTTCGCCTTTATGCTTGCTTGTTTAGGGTTTTTGATGACCATGGCCGCGGATTGTGTCATTTCCTATCTCTATCGCAAACCAACTGCTGATTCTTCAACCGATGTTGAACGTCGAGGAGCTGCAACTTCACCCTCAAAGTTTCAGGTCCAAAATGGCAGCAATGGGCATCATCCACATCCACACCAAGCCCTCACAACAATGGGTTCATTTGGGGACAGCATTTTACTGATTGTTGCATTGTGCTTTCACTCCGTCTTCGAAGGCATCGCCATTGGAGTTGCAGAGACCAAAGCCGATGCCTGGAAAGCCCTATGGACAATCTCCCTCCACAAGGTCTTTGCAGCCATTGCCATGGGCATTGCTCTCCTCCGAATGATCCCAAACCGCCCTTTGTTGTCGAGTGCTGCCTATTCCTTTGCTTTTGCCATCTCGAGCCCCATCGGCATTGCAATTGGAATCATAATCGATGCCACGACACAAGGTGCGGTGGCAGATTGGATATTTGCAATCTCAATGGGACTGGCTTGTGGAGTGTTCATTTATGTGTCCATAAACCATCTGCTTTCAAAGGGATACACCCCTAGGGATTCAGTTCTTGTGGATAATCCAAATTACAAGTTTCTTGCTGTGCTTTTAGGAATTGGAGTTATAGCTATTGTGATGATTTGGGACACTTGA 1008 50.1 MLRFLFLLLLSSAAAHSGHSDDDDSASGDSPSPSPNLRSKPLILVKITCLILIFFGTFIPGISPCFFKWNDGFLLLGTQFAGGVFFGTAMMHFLSDANETFRDLTDNAYPFAFMLACLGFLMTMAADCVISYLYRKPTADSSTDVERRGAATSPSKFQVQNGSNGHHPHPHQALTTMGSFGDSILLIVALCFHSVFEGIAIGVAETKADAWKALWTISLHKVFAAIAMGIALLRMIPNRPLLSSAAYSFAFAISSPIGIAIGIIIDATTQGAVADWIFAISMGLACGVFIYVSINHLLSKGYTPRDSVLVDNPNYKFLAVLLGIGVIAIVMIWDT* 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13563646 13566678 + Chy1G011660.1 Chy01g01166 218347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01166 335 Pfam ZIP Zinc transporter 44 330 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Chy01g01166 335 PANTHER ZINC TRANSPORTER 11 22 334 - -
Chy01g01166 335 Gene3D - 15 147 - -
Chy01g01166 335 PANTHER ZINC/IRON TRANSPORTER 22 334 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01166 Chy-Chr1:13563646 Chy12g00489 Chy-Chr12:6457471 6.53E-12 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01166 K14709 - csv:101208105 575.089