Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01195 ATGAAGCTTTGTTCCCAAGCTCTTGAGGCCTTCACGGACAAGCTCCAGAAGCCTGATGTCATCAACCAGGAGTTCGCACGATTGCAGGCCAAGAGAATAACTGCATCTGATATGAAGAGAAGTTGCTCTGTGGCACTTGACAATGTCAACGTAAATAAAAATCGTTACATGGATGTATTACCCTTTGATGAGACTAGAGTTGTACTTGACTCATGTAAGGATTACAGACCTTCTGCAAGGGGTTATATCAATGCTAGCTTTATTTCGACTTCCTCCTCAAAAAGCCTTTCTAAGTTTATTGCCACTCAAGGTCCGTTACCACACACTTACGAGGATTTCTGGGAGATGGTATTTCAGTATAAATGCCCTTCAATCTTGATGCTTACTCGTCTTGTTGATAATTACAAGATGGTAAAGTGTGGAGATTATTTTCAGGCAGAAGATGGTCCTAGAGATTTTGGTAATCTAATTGTTCTCTCTAAATGGATAAAATCTTCCAACTCCTCTCTTATACTGCGCCATTTGGAGGTGACCCATAAAGAGTCGGAAGAATCTGTGGCTGTTCTACATATTCAGTACCCAGAATGGCCTGACCATGGAGTTCCTAATGACACACTTGCAGTTCGTGAAATGTTGAAGAGGCTGTATCATTTACCTCCTGATCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGAAGAACCGGAACATATTGCGCAATTCATAACACAATTCAGAGAATCCTTATTGGAGACATGTCTGCTTTAGATCTTGTCAGTACCATTTCTTCATTTAGGTCCCAGCGAATTGGAATGGTTCAAACACTGGTAAACTAA 840 41.55 MKLCSQALEAFTDKLQKPDVINQEFARLQAKRITASDMKRSCSVALDNVNVNKNRYMDVLPFDETRVVLDSCKDYRPSARGYINASFISTSSSKSLSKFIATQGPLPHTYEDFWEMVFQYKCPSILMLTRLVDNYKMVKCGDYFQAEDGPRDFGNLIVLSKWIKSSNSSLILRHLEVTHKESEESVAVLHIQYPEWPDHGVPNDTLAVREMLKRLYHLPPDLGPIVVHCSAGIGRTGTYCAIHNTIQRILIGDMSALDLVSTISSFRSQRIGMVQTLVN* 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14075403 14084463 - Chy1G011950.1 Chy01g01195 218376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01195 279 Pfam Protein-tyrosine phosphatase 50 277 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 206 279 IPR000387 GO:0016311|GO:0016791
Chy01g01195 279 PRINTS Protein tyrosine phosphatase signature 81 88 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 PRINTS Protein tyrosine phosphatase signature 99 119 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 PRINTS Protein tyrosine phosphatase signature 186 203 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 PRINTS Protein tyrosine phosphatase signature 257 272 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 PRINTS Protein tyrosine phosphatase signature 224 242 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 SMART ptp_7 187 279 IPR003595 -
Chy01g01195 279 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 7 277 IPR029021 -
Chy01g01195 279 ProSiteProfiles PTP type protein phosphatase domain profile. 21 279 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 Gene3D Protein tyrosine phosphatase superfamily 2 279 IPR029021 -
Chy01g01195 279 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 3 278 - -
Chy01g01195 279 SMART PTPc_3 20 279 IPR000242 GO:0004725|GO:0006470
Chy01g01195 279 ProSitePatterns Tyrosine specific protein phosphatases active site. 227 237 IPR016130 GO:0016311|GO:0016791
Chy01g01195 279 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 3 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01195 - - cmo:103494974 541.962