Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01241 | ATGGCATTCAGTTCTGCAGTAGCATCGCATCTTCATGCTTTCCGAACCTCCAATCTCCGATTGCCTGACTCCAACAAATCATGGAGCCGGAGGCGGCGAATCACAGTGGTTCCTGTAATCCGGTGCGAGAAGGTCGTGGGAATCGATCTAGGAACGACGAACTCGGCGGTGGCGGCAATGGAGGGAGGGCAGCCGACTATTGTAACCAACGCGGAGGGACAGAGAACGACGCCGTCGGTAGTGGCGTATACGAAGAGCGGGGATCGGCTTGTTGGTCAGTTGGCGAAACGGCAGGCGGTGGTTAATCCGGAGAATACCTTCTTCTCTGTGAAGAGGTTTATTGGAAGGAAAATGGCGGAGGTGGATGAAGAAGCGAAGCAAGTTTCATACAAGGTTACCGCCGACGAGAATGGGAATGTAAAGCTCGATTGCCCTGCCGTCGGTAAGCAGTTCGCCGCCGAGGAGATTTCCGCTCAGGTTTTAAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAATGATCAAGTAGGAAAAGCAGTTGTAACAGTACCAGCATATTTCAATGACTCTCAGAGGACGGCGACGAAAGATGCTGGTCGGATTGCTGGTCTTGAAGTTCTTCGCATCATCAATGAACCAACTGCTGCTTCCCTTGCTTATGGCTTTGACAAGAAAACCAATGAGACCATTCTCGTTTTCGACCTTGGTGGTGGAACGTTCGATGTCTCAGTCCTCGAGGTTGGAGATGGTGTATTTGAGGTTCTTTCTACTTCAGGCGATACACATTTGGGTGGTGATGATTTTGACAAGAGAATTGTCGATTGGCTTGCCGAGAGCTTTAAGAGAGATGAAGGAATTGACCTTTTGAAAGATAAACAGGCCCTGCAACGTCTAACCGAAACTGCTGAGAAGGCAAAGATTGAGCTATCATCTCTAACACAAACGAATATTAGTTTACCATTTATCACTGCGACCAACGATGGCCCAAAGCATATTGATACTACACTTACTAGGGTTAAGTTTGAAGATTTGTGTTCAGACTTGCTAGATAGGTTGCAATCACCGGTGGAAACGGCTTTAAAGGATGCACAGTTGTCGTTCAAAGATATAGATGAAGTCATTCTTATTGGTGGCTCAACTCGTATCCCAGCAGTTCAGGAGCTCGTCAAGAAAATGACAGGGAAAAATCCAAATATGACTGTAAATCCCGACGAAGTGGTGGCTCTTGGGGCCGCAGTTCAGGCTGGTGTTCTGGCTGGAGATGTCAGTGACATTGTCCTCTTGGATGTCACACCTCTCTCTCTTGGTTTGGAAACGTTGGGTGGAGTGATGACCAAAATCATTCCAAGGAACACGACCTTACCCACATCCAAATCGGAGGTGTTTTCAACGGCAGCAGATGGACAAACAAGTGTTGAAATTAATGTATGTCAAGGTGAACGAGAGTTTGTTCGAGACAACAAGTCTCTCGGGCGGTTTCTCTTGGACGGTATCCCTCCTGCACCTCGCGGTGTTCCTCAGATTGAAGTGAAATTTGACATTGATGCTAATGGTATTCTCTCAGTCACTGCCATTGACAAGGGAACTGGGAAGAAGCAGGACATCACAATTACTGGCGCTAGCACTTTACCAAGTGATGAGGTGGATAGAATGGTTAAAGAAGCAGAGAATTTCGCAAGAGAAGATGAGGAGAAAAGGGATGCAATAGACACAAAGAACCAAGCAGATTCTGTTGTGTACCAGACTGAAAAACAGCTAAAGGACCTGGGAGACAAAATTCCCACATCGGTTCGAGATACCGTAGAAGCTAAGCTAAAAGAACTTAAGGATGCCATCTCTAATGGCTCGATCGAAACTATAAAAATTGCCATGGCTGCACTGAATCAAGAAGTAATGCAGATGGGGCAGTCCCTCTACAGCCAGGCAACAGCCTCTAGTGCTGGGACTTCATCCAGAGCACAGTCTACTTCATCGGGTTCATCCGGAGAAATTGATGGGGATGTTGTTGATGCTGATTTTGTTGATAGTGAGTGA | 2034 | 46.95 | MAFSSAVASHLHAFRTSNLRLPDSNKSWSRRRRITVVPVIRCEKVVGIDLGTTNSAVAAMEGGQPTIVTNAEGQRTTPSVVAYTKSGDRLVGQLAKRQAVVNPENTFFSVKRFIGRKMAEVDEEAKQVSYKVTADENGNVKLDCPAVGKQFAAEEISAQVLRKLVDDASKFLNDQVGKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDKKTNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATNDGPKHIDTTLTRVKFEDLCSDLLDRLQSPVETALKDAQLSFKDIDEVILIGGSTRIPAVQELVKKMTGKNPNMTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVCQGEREFVRDNKSLGRFLLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKKQDITITGASTLPSDEVDRMVKEAENFAREDEEKRDAIDTKNQADSVVYQTEKQLKDLGDKIPTSVRDTVEAKLKELKDAISNGSIETIKIAMAALNQEVMQMGQSLYSQATASSAGTSSRAQSTSSGSSGEIDGDVVDADFVDSE* | 678 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 15211938 | 15216333 | + | Chy1G012410.1 | Chy01g01241 | 218422 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01241 | 677 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 48 | 55 | IPR018181 | - | |
Chy01g01241 | 677 | Pfam | Hsp70 protein | 45 | 639 | IPR013126 | GO:0005524|GO:0140662 | |
Chy01g01241 | 677 | Gene3D | - | 221 | 402 | - | - | |
Chy01g01241 | 677 | MobiDBLite | consensus disorder prediction | 639 | 677 | - | - | |
Chy01g01241 | 677 | Gene3D | - | 543 | 643 | IPR029048 | - | |
Chy01g01241 | 677 | Gene3D | Actin; Chain A, domain 4 | 265 | 352 | - | - | |
Chy01g01241 | 677 | SUPERFAMILY | Actin-like ATPase domain | 227 | 418 | IPR043129 | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 72 | 84 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 424 | 443 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 95 | 103 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 401 | 421 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 238 | 248 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 44 | 57 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 370 | 386 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 179 | 199 | - | - | |
Chy01g01241 | 677 | PRINTS | 70kDa heat shock protein signature | 505 | 521 | - | - | |
Chy01g01241 | 677 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 420 | 576 | IPR029047 | - | |
Chy01g01241 | 677 | Hamap | Chaperone protein DnaK [dnaK]. | 42 | 676 | IPR012725 | GO:0005524|GO:0006457|GO:0051082 | |
Chy01g01241 | 677 | TIGRFAM | prok_dnaK: chaperone protein DnaK | 44 | 639 | IPR012725 | GO:0005524|GO:0006457|GO:0051082 | |
Chy01g01241 | 677 | CDD | HSPA9-Ssq1-like_NBD | 42 | 418 | - | - | |
Chy01g01241 | 677 | Gene3D | - | 46 | 415 | - | - | |
Chy01g01241 | 677 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 416 | 541 | IPR029047 | - | |
Chy01g01241 | 677 | Coils | Coil | 288 | 315 | - | - | |
Chy01g01241 | 677 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 232 | 245 | IPR018181 | - | |
Chy01g01241 | 677 | SUPERFAMILY | Actin-like ATPase domain | 44 | 224 | IPR043129 | - | |
Chy01g01241 | 677 | MobiDBLite | consensus disorder prediction | 639 | 663 | - | - | |
Chy01g01241 | 677 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 373 | 387 | IPR018181 | - | |
Chy01g01241 | 677 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 35 | 653 | IPR013126 | GO:0005524|GO:0140662 | |
Chy01g01241 | 677 | PANTHER | STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE | 35 | 653 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01241 | Chy-Chr1:15211938 | Chy05g00642 | Chy-Chr5:7925814 | 0 | dispersed | |
Chy01g01241 | Chy-Chr1:15211938 | Chy09g00780 | Chy-Chr9:10460270 | 4.43E-178 | transposed | |
Chy01g01241 | Chy-Chr1:15211938 | Chy08g00766 | Chy-Chr8:15354481 | 4.11E-178 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01241 | K03283 | - | csv:101212307 | 1216.83 |