Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01241 ATGGCATTCAGTTCTGCAGTAGCATCGCATCTTCATGCTTTCCGAACCTCCAATCTCCGATTGCCTGACTCCAACAAATCATGGAGCCGGAGGCGGCGAATCACAGTGGTTCCTGTAATCCGGTGCGAGAAGGTCGTGGGAATCGATCTAGGAACGACGAACTCGGCGGTGGCGGCAATGGAGGGAGGGCAGCCGACTATTGTAACCAACGCGGAGGGACAGAGAACGACGCCGTCGGTAGTGGCGTATACGAAGAGCGGGGATCGGCTTGTTGGTCAGTTGGCGAAACGGCAGGCGGTGGTTAATCCGGAGAATACCTTCTTCTCTGTGAAGAGGTTTATTGGAAGGAAAATGGCGGAGGTGGATGAAGAAGCGAAGCAAGTTTCATACAAGGTTACCGCCGACGAGAATGGGAATGTAAAGCTCGATTGCCCTGCCGTCGGTAAGCAGTTCGCCGCCGAGGAGATTTCCGCTCAGGTTTTAAGAAAGCTGGTGGATGATGCATCAAAGTTCTTGAATGATCAAGTAGGAAAAGCAGTTGTAACAGTACCAGCATATTTCAATGACTCTCAGAGGACGGCGACGAAAGATGCTGGTCGGATTGCTGGTCTTGAAGTTCTTCGCATCATCAATGAACCAACTGCTGCTTCCCTTGCTTATGGCTTTGACAAGAAAACCAATGAGACCATTCTCGTTTTCGACCTTGGTGGTGGAACGTTCGATGTCTCAGTCCTCGAGGTTGGAGATGGTGTATTTGAGGTTCTTTCTACTTCAGGCGATACACATTTGGGTGGTGATGATTTTGACAAGAGAATTGTCGATTGGCTTGCCGAGAGCTTTAAGAGAGATGAAGGAATTGACCTTTTGAAAGATAAACAGGCCCTGCAACGTCTAACCGAAACTGCTGAGAAGGCAAAGATTGAGCTATCATCTCTAACACAAACGAATATTAGTTTACCATTTATCACTGCGACCAACGATGGCCCAAAGCATATTGATACTACACTTACTAGGGTTAAGTTTGAAGATTTGTGTTCAGACTTGCTAGATAGGTTGCAATCACCGGTGGAAACGGCTTTAAAGGATGCACAGTTGTCGTTCAAAGATATAGATGAAGTCATTCTTATTGGTGGCTCAACTCGTATCCCAGCAGTTCAGGAGCTCGTCAAGAAAATGACAGGGAAAAATCCAAATATGACTGTAAATCCCGACGAAGTGGTGGCTCTTGGGGCCGCAGTTCAGGCTGGTGTTCTGGCTGGAGATGTCAGTGACATTGTCCTCTTGGATGTCACACCTCTCTCTCTTGGTTTGGAAACGTTGGGTGGAGTGATGACCAAAATCATTCCAAGGAACACGACCTTACCCACATCCAAATCGGAGGTGTTTTCAACGGCAGCAGATGGACAAACAAGTGTTGAAATTAATGTATGTCAAGGTGAACGAGAGTTTGTTCGAGACAACAAGTCTCTCGGGCGGTTTCTCTTGGACGGTATCCCTCCTGCACCTCGCGGTGTTCCTCAGATTGAAGTGAAATTTGACATTGATGCTAATGGTATTCTCTCAGTCACTGCCATTGACAAGGGAACTGGGAAGAAGCAGGACATCACAATTACTGGCGCTAGCACTTTACCAAGTGATGAGGTGGATAGAATGGTTAAAGAAGCAGAGAATTTCGCAAGAGAAGATGAGGAGAAAAGGGATGCAATAGACACAAAGAACCAAGCAGATTCTGTTGTGTACCAGACTGAAAAACAGCTAAAGGACCTGGGAGACAAAATTCCCACATCGGTTCGAGATACCGTAGAAGCTAAGCTAAAAGAACTTAAGGATGCCATCTCTAATGGCTCGATCGAAACTATAAAAATTGCCATGGCTGCACTGAATCAAGAAGTAATGCAGATGGGGCAGTCCCTCTACAGCCAGGCAACAGCCTCTAGTGCTGGGACTTCATCCAGAGCACAGTCTACTTCATCGGGTTCATCCGGAGAAATTGATGGGGATGTTGTTGATGCTGATTTTGTTGATAGTGAGTGA 2034 46.95 MAFSSAVASHLHAFRTSNLRLPDSNKSWSRRRRITVVPVIRCEKVVGIDLGTTNSAVAAMEGGQPTIVTNAEGQRTTPSVVAYTKSGDRLVGQLAKRQAVVNPENTFFSVKRFIGRKMAEVDEEAKQVSYKVTADENGNVKLDCPAVGKQFAAEEISAQVLRKLVDDASKFLNDQVGKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFDKKTNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAESFKRDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATNDGPKHIDTTLTRVKFEDLCSDLLDRLQSPVETALKDAQLSFKDIDEVILIGGSTRIPAVQELVKKMTGKNPNMTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVCQGEREFVRDNKSLGRFLLDGIPPAPRGVPQIEVKFDIDANGILSVTAIDKGTGKKQDITITGASTLPSDEVDRMVKEAENFAREDEEKRDAIDTKNQADSVVYQTEKQLKDLGDKIPTSVRDTVEAKLKELKDAISNGSIETIKIAMAALNQEVMQMGQSLYSQATASSAGTSSRAQSTSSGSSGEIDGDVVDADFVDSE* 678
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 15211938 15216333 + Chy1G012410.1 Chy01g01241 218422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01241 677 ProSitePatterns Heat shock hsp70 proteins family signature 1. 48 55 IPR018181 -
Chy01g01241 677 Pfam Hsp70 protein 45 639 IPR013126 GO:0005524|GO:0140662
Chy01g01241 677 Gene3D - 221 402 - -
Chy01g01241 677 MobiDBLite consensus disorder prediction 639 677 - -
Chy01g01241 677 Gene3D - 543 643 IPR029048 -
Chy01g01241 677 Gene3D Actin; Chain A, domain 4 265 352 - -
Chy01g01241 677 SUPERFAMILY Actin-like ATPase domain 227 418 IPR043129 -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 72 84 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 424 443 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 95 103 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 401 421 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 238 248 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 44 57 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 370 386 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 179 199 - -
Chy01g01241 677 PRINTS 70kDa heat shock protein signature 505 521 - -
Chy01g01241 677 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 420 576 IPR029047 -
Chy01g01241 677 Hamap Chaperone protein DnaK [dnaK]. 42 676 IPR012725 GO:0005524|GO:0006457|GO:0051082
Chy01g01241 677 TIGRFAM prok_dnaK: chaperone protein DnaK 44 639 IPR012725 GO:0005524|GO:0006457|GO:0051082
Chy01g01241 677 CDD HSPA9-Ssq1-like_NBD 42 418 - -
Chy01g01241 677 Gene3D - 46 415 - -
Chy01g01241 677 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 541 IPR029047 -
Chy01g01241 677 Coils Coil 288 315 - -
Chy01g01241 677 ProSitePatterns Heat shock hsp70 proteins family signature 2. 232 245 IPR018181 -
Chy01g01241 677 SUPERFAMILY Actin-like ATPase domain 44 224 IPR043129 -
Chy01g01241 677 MobiDBLite consensus disorder prediction 639 663 - -
Chy01g01241 677 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Chy01g01241 677 PANTHER HEAT SHOCK PROTEIN 70KDA 35 653 IPR013126 GO:0005524|GO:0140662
Chy01g01241 677 PANTHER STROMAL 70 KDA HEAT SHOCK-RELATED PROTEIN, CHLOROPLASTIC-LIKE 35 653 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01241 Chy-Chr1:15211938 Chy05g00642 Chy-Chr5:7925814 0 dispersed
Chy01g01241 Chy-Chr1:15211938 Chy09g00780 Chy-Chr9:10460270 4.43E-178 transposed
Chy01g01241 Chy-Chr1:15211938 Chy08g00766 Chy-Chr8:15354481 4.11E-178 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01241 K03283 - csv:101212307 1216.83