Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01284 | ATGCTGATGGACCCTAATTTCTCGTCGGCGAAGCCACCGCATCCGGTGGCGATGGACATCGAACATATGCCGGAAAATCCTCATCGTGCTTCCCACCACCGCCGCTCCCACTCCGACACTTCCTTTCGCTTCCCAAACCTTGATGAACTTCTCTTCTTCGACCCTTCAGAGCTCGACCTCTCCATGCTCTCTTCGCCTTCTTCTCCCCCTACTGCCACCACTCCCATCGCCGTTAATTCCTCTAATGCCAAATTTTCTGATGACGCCGTTCGCCCTAAGCCCGAGCCGATTGCCTCTGGACCTTTTGGTGGTCACTTGCGGAGCTTGTCTATGGACTCTGATTTCTTCAAGAATTTGGACCTTGGTGGTGATAGTGGGGAAATTGATTCTTTGGGGAAGAAGACTCCGGTGAGTGAACAACGGCCAGTTCGTCATCGACATAGCTTATCCATGGATGGTTCTTCGTCGTCGTTTGAGGCTGATTCAACCCTAGTAATTGATGGAGTGAAGAAGGCGATGGACCCGGAGAGACTTGCGGAGCTTGCCCTAATTGACCCGAAAAGAGCTAAAAGGATTCTTGCGAACAGACAATCTGCGGCTCGTTCGAAAGAGAGGAAGATACGATATACGAATGAACTGGAGAGAAAGGTTCAGACTCTGCAGTCCGAAGCTACCACTCTGTCTGCGCAGGTGACCATTCTACAGCGAGATACTAGTGGATTAACTGTGGAAAATAAGGAACTCAAACTTCGGTTACAGGCTATGGAGCAACAAGCACAACTTCGAGATGCTCTGAGTGAAGCTTTGAAGGAAGAAGTTCAACGACTTAGAATTGCCGCAGGCCAGGTTGCATCAATCAATGGAAATCCTTTCAACCGACCTCTGCAATATCCTTCATCCCGACCACCTGTACACCATTTTAGTAGCTCCCATACTCAGCAGGGTCAACAGCAGCCACCACCCATGTTGGCTACCAACCAGCAGCAATCAGACCCGAAATGGACAAACTCCTCTCAGCTTCTCAGTCGAAGTCCCAACGGCGAAACAAAGCCTTAG | 1056 | 50.19 | MLMDPNFSSAKPPHPVAMDIEHMPENPHRASHHRRSHSDTSFRFPNLDELLFFDPSELDLSMLSSPSSPPTATTPIAVNSSNAKFSDDAVRPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQRPVRHRHSLSMDGSSSSFEADSTLVIDGVKKAMDPERLAELALIDPKRAKRILANRQSAARSKERKIRYTNELERKVQTLQSEATTLSAQVTILQRDTSGLTVENKELKLRLQAMEQQAQLRDALSEALKEEVQRLRIAAGQVASINGNPFNRPLQYPSSRPPVHHFSSSHTQQGQQQPPPMLATNQQQSDPKWTNSSQLLSRSPNGETKP* | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 16197847 | 16200513 | - | Chy1G012840.1 | Chy01g01284 | 218465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01284 | 351 | Coils | Coil | 238 | 258 | - | - | |
Chy01g01284 | 351 | Coils | Coil | 210 | 230 | - | - | |
Chy01g01284 | 351 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 7 | 330 | - | - | |
Chy01g01284 | 351 | Gene3D | - | 186 | 239 | - | - | |
Chy01g01284 | 351 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Chy01g01284 | 351 | MobiDBLite | consensus disorder prediction | 287 | 351 | - | - | |
Chy01g01284 | 351 | CDD | bZIP_plant_RF2 | 188 | 237 | IPR044759 | GO:0003700|GO:0006355 | |
Chy01g01284 | 351 | Pfam | bZIP transcription factor | 187 | 234 | IPR004827 | GO:0003700|GO:0006355 | |
Chy01g01284 | 351 | SUPERFAMILY | Leucine zipper domain | 187 | 238 | IPR046347 | GO:0003700|GO:0006355 | |
Chy01g01284 | 351 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 185 | 248 | IPR004827 | GO:0003700|GO:0006355 | |
Chy01g01284 | 351 | MobiDBLite | consensus disorder prediction | 302 | 351 | - | - | |
Chy01g01284 | 351 | SMART | brlzneu | 183 | 247 | IPR004827 | GO:0003700|GO:0006355 | |
Chy01g01284 | 351 | PANTHER | BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED | 7 | 330 | - | - | |
Chy01g01284 | 351 | MobiDBLite | consensus disorder prediction | 126 | 155 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01284 | Chy-Chr1:16197847 | Chy03g00519 | Chy-Chr3:7178412 | 2.30E-125 | dispersed | |
Chy01g01284 | Chy-Chr1:16197847 | Chy11g00653 | Chy-Chr11:7905677 | 7.59E-21 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17325 | PF00170 | bZIP_1 | 6.00E-08 | CL0018 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01284 | K20557 | - | csv:101207973 | 635.18 |