Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01284 ATGCTGATGGACCCTAATTTCTCGTCGGCGAAGCCACCGCATCCGGTGGCGATGGACATCGAACATATGCCGGAAAATCCTCATCGTGCTTCCCACCACCGCCGCTCCCACTCCGACACTTCCTTTCGCTTCCCAAACCTTGATGAACTTCTCTTCTTCGACCCTTCAGAGCTCGACCTCTCCATGCTCTCTTCGCCTTCTTCTCCCCCTACTGCCACCACTCCCATCGCCGTTAATTCCTCTAATGCCAAATTTTCTGATGACGCCGTTCGCCCTAAGCCCGAGCCGATTGCCTCTGGACCTTTTGGTGGTCACTTGCGGAGCTTGTCTATGGACTCTGATTTCTTCAAGAATTTGGACCTTGGTGGTGATAGTGGGGAAATTGATTCTTTGGGGAAGAAGACTCCGGTGAGTGAACAACGGCCAGTTCGTCATCGACATAGCTTATCCATGGATGGTTCTTCGTCGTCGTTTGAGGCTGATTCAACCCTAGTAATTGATGGAGTGAAGAAGGCGATGGACCCGGAGAGACTTGCGGAGCTTGCCCTAATTGACCCGAAAAGAGCTAAAAGGATTCTTGCGAACAGACAATCTGCGGCTCGTTCGAAAGAGAGGAAGATACGATATACGAATGAACTGGAGAGAAAGGTTCAGACTCTGCAGTCCGAAGCTACCACTCTGTCTGCGCAGGTGACCATTCTACAGCGAGATACTAGTGGATTAACTGTGGAAAATAAGGAACTCAAACTTCGGTTACAGGCTATGGAGCAACAAGCACAACTTCGAGATGCTCTGAGTGAAGCTTTGAAGGAAGAAGTTCAACGACTTAGAATTGCCGCAGGCCAGGTTGCATCAATCAATGGAAATCCTTTCAACCGACCTCTGCAATATCCTTCATCCCGACCACCTGTACACCATTTTAGTAGCTCCCATACTCAGCAGGGTCAACAGCAGCCACCACCCATGTTGGCTACCAACCAGCAGCAATCAGACCCGAAATGGACAAACTCCTCTCAGCTTCTCAGTCGAAGTCCCAACGGCGAAACAAAGCCTTAG 1056 50.19 MLMDPNFSSAKPPHPVAMDIEHMPENPHRASHHRRSHSDTSFRFPNLDELLFFDPSELDLSMLSSPSSPPTATTPIAVNSSNAKFSDDAVRPKPEPIASGPFGGHLRSLSMDSDFFKNLDLGGDSGEIDSLGKKTPVSEQRPVRHRHSLSMDGSSSSFEADSTLVIDGVKKAMDPERLAELALIDPKRAKRILANRQSAARSKERKIRYTNELERKVQTLQSEATTLSAQVTILQRDTSGLTVENKELKLRLQAMEQQAQLRDALSEALKEEVQRLRIAAGQVASINGNPFNRPLQYPSSRPPVHHFSSSHTQQGQQQPPPMLATNQQQSDPKWTNSSQLLSRSPNGETKP* 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16197847 16200513 - Chy1G012840.1 Chy01g01284 218465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01284 351 Coils Coil 238 258 - -
Chy01g01284 351 Coils Coil 210 230 - -
Chy01g01284 351 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 330 - -
Chy01g01284 351 Gene3D - 186 239 - -
Chy01g01284 351 MobiDBLite consensus disorder prediction 1 20 - -
Chy01g01284 351 MobiDBLite consensus disorder prediction 287 351 - -
Chy01g01284 351 CDD bZIP_plant_RF2 188 237 IPR044759 GO:0003700|GO:0006355
Chy01g01284 351 Pfam bZIP transcription factor 187 234 IPR004827 GO:0003700|GO:0006355
Chy01g01284 351 SUPERFAMILY Leucine zipper domain 187 238 IPR046347 GO:0003700|GO:0006355
Chy01g01284 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 185 248 IPR004827 GO:0003700|GO:0006355
Chy01g01284 351 MobiDBLite consensus disorder prediction 302 351 - -
Chy01g01284 351 SMART brlzneu 183 247 IPR004827 GO:0003700|GO:0006355
Chy01g01284 351 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 7 330 - -
Chy01g01284 351 MobiDBLite consensus disorder prediction 126 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01284 Chy-Chr1:16197847 Chy03g00519 Chy-Chr3:7178412 2.30E-125 dispersed
Chy01g01284 Chy-Chr1:16197847 Chy11g00653 Chy-Chr11:7905677 7.59E-21 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17325 PF00170 bZIP_1 6.00E-08 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01284 K20557 - csv:101207973 635.18