Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01287 ATGTCTACACTCAACCAAAGCAGCTCCCTCAATAGTTGCACCAAGTTTCCCATCCCTCCCCGTGACAACCATGTAGTAGATGAAATCCAATCCCAACCCTTTGACTACTCCAAACGTGCCCAATGGCTACGTCCAGCTGTCCTCGGTGCCAACGATGGCCTCGTCTCTACGGCATCTCTCATGATGGGTGTTGGTGCTGTCAAGCACGACGTCAAGGCCATGATCCTCACTGGCTTTGCCGGTCTCATTGCAGGAGTCGTGACAATAGAAAAGAGTTGGAGGAAGAGGAGAGAGCAAAACTGCCGAACCCTCTTCAAGGCAACAGTGGCTTCAGCCTTGGCCTTTTCTACGGGGGCAATGGTGCCACTATTGGCTGCGGCGTTCATAAGGGAATATAGGGTTCGGCTCGGGGTGGTGGTGGTGGTAGTCACAGTGGCACTAGTTGGGTTTGGTTGGTTGGGAGCAGCATTAGGGAAGGCGCCAACAGTTAGGTCGGTGGTTAGGGTCTTGATAGGAGGGTGGGCAGCTATGGCTGTAACTTTTGGATTGACGAAGTTGATTGCATGA 567 52.73 MSTLNQSSSLNSCTKFPIPPRDNHVVDEIQSQPFDYSKRAQWLRPAVLGANDGLVSTASLMMGVGAVKHDVKAMILTGFAGLIAGVVTIEKSWRKRREQNCRTLFKATVASALAFSTGAMVPLLAAAFIREYRVRLGVVVVVVTVALVGFGWLGAALGKAPTVRSVVRVLIGGWAAMAVTFGLTKLIA* 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16269114 16269756 + Chy1G012870.1 Chy01g01287 218468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01287 188 Pfam VIT family 102 184 IPR008217 GO:0005384|GO:0030026
Chy01g01287 188 Pfam VIT family 43 87 IPR008217 GO:0005384|GO:0030026
Chy01g01287 188 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 187 IPR008217 GO:0005384|GO:0030026
Chy01g01287 188 PANTHER VACUOLAR IRON TRANSPORTER HOMOLOG 1-RELATED 27 187 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01287 Chy-Chr1:16269114 Chy03g00517 Chy-Chr3:7146739 5.83E-63 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01287 K22736 - csv:101210510 293.123