Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01310 ATGACGCTTTACGAAGTGAATCCAGGGGAGACTTGCAAAGGTTTGGAAGGTGAGGATCTGTATGAGGAACTGTGGAAGGCATGTGCAGGACCTCTTGTTGAAGTTCCTGTCGATGGAGAAAGGGTTTTTTACTTCCCTCAGGGTCATATGGAACAATTGGAAGAGTCCACAAATCAGGAGCTTAATCACCAAATCCCTCATTTTGATCTCCCTCCCAAGATCCTATGTCGTGTTGTTAACATTCGTTTGCTGGCTGAAAAGGAAACGGATGAAGTCTATGCTCAAATCACTTTATACCCAGAGGCTGATCAAAGTGAGCCCCAAAGCGCTGATCCAGAGCCACCTGAACGTACAAGGCAAACTGTTCATTCTTTTTGTAAGATTTTGACTGCTTCTGATACTAGCACTCATGGAGGTTTCTCAGTTCTTAGAAAGCATGCCACTGAATGTCTTCCTCCCCTTGATATGAGCCAATCCACCCCAACTCAGGAGTTAGCTGCCAAGGATCTTCATGGTTATGAGTGGAAATTTAAGCATATTTTCAGAGGTCAACCGCGGAGGCATTTGCTAACTACGGGGTGGAGTACATTTGTTACATCAAAACGGCTGGTTGCTGGGGATGCTTTTGTTTTCTTAAGGGGTGACAATGGAGAACTGAGGGTTGGCGTTCGGCGGCAGGCTCGGCAGCAGAGCTTGATGCCTTCCTCTGTGATATCTAGCCATAGCATGCATCTTGGAGTTCTTGCCACTGCTTCTCATGCTGTTCGTACCCAGACCTATTTCGTTGTGTATTACAAACCGAGAACTAGCCAATTCATCATCAGCTTAAACAAATACTTGGAGACTGTTAAAAATGGTTATGAAGTGGGGATGCGCTTCAAGATGAGATTTGAAGGAGAAGAATCACCAGAGAGAAGGTTCACTGGAACTATTGTTGGTGTTGGTGATATGTCTCCGCAATGGTTGGATTCGAAATGGCGATCTCTAAAGATTCAATGGGATGAACCTGCTACGATTCAAAGGCCCGAGCGAGTTTCTCCATGGGAGATTGAACCCTTTGTACCTTCTGCCTCCTTAAACTTCACTCATCCTGCTATAAAGAGTAAAAGGGCCCGTCCTGTTGAGATTCCTCCTCCTGAAATTACTTCTGGTTCAGCTCCTTCAGGATTTTGGCTCCAAGGATCGACGATTTCTCACGAAATATCCCAACTAAGTGGTACGAATGAAGTTCAAACCAGCAACAACCGGGTTGTCTGGACTCTCGGACAGCGAAAACTTGATAGCAATAGCAGCCATTGTAATCCAGTAGCAAATGTTGAAGGCATTTGGCCTTCTCCTCCACTCAATATTTCCTTGAACGTTTACCCAGATTCAACATTTGAAAGAGAACTTGTTCAACAAAAACATCCACTATCCTCTCCTTATTCTTCATCTGTCACTTCAAAGCCTAGTAGTGACCTCATACAGCCCGATCAATTGGAGAAAGGGGGTAAACCCGACATTTCTCTTGGTTGCCGAATATTTGGAATTGATTTGAAAAATAACTGTAGCATTGTCCCTACCTTGGAAAGAAGATCGTCTTGCCTAATGATGGTGACCAATGGTGCCAAAGAACCTGTAGTTACAGCTGTTGTGACACCTCAAGTCGATGTGGGAAACCTCTCACAGCCTTCAAAGGAGCAGCAACTCTCATCAGAGTTGTTGACAAAGGGAACACAAACAAAACACATCTCCAATCTATCGTCAAGAACACGTACAAAGGTACAAATGCAAGGAGTTGCAGTAGGTCGAGCGGTAGACTTGACAACACTTGAAGGGTACGAAGATCTGATAGACGAGCTTGAAAATGTGTTTGAAATAAAAGGAGAACTTCGTGGAATAAACAAATGGTCTATCGTTTTCACAGACGACGAAAACGATATGATGCTCGTGGGGGACGATCCATGGCCAGAGTTTTGTAAGATGGTGAAGAGGATCTTTATATGTTCAAGTGAAGAAGTAAAGAAGATGAGTAGGGAGAGCAAGATTGTTTCTCCATCATCCTTAGATAGCCTGGATTCAGAGCGAAAGACTGAATCCTAA 2082 44.14 MTLYEVNPGETCKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCRVVNIRLLAEKETDEVYAQITLYPEADQSEPQSADPEPPERTRQTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQFIISLNKYLETVKNGYEVGMRFKMRFEGEESPERRFTGTIVGVGDMSPQWLDSKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSASLNFTHPAIKSKRARPVEIPPPEITSGSAPSGFWLQGSTISHEISQLSGTNEVQTSNNRVVWTLGQRKLDSNSSHCNPVANVEGIWPSPPLNISLNVYPDSTFERELVQQKHPLSSPYSSSVTSKPSSDLIQPDQLEKGGKPDISLGCRIFGIDLKNNCSIVPTLERRSSCLMMVTNGAKEPVVTAVVTPQVDVGNLSQPSKEQQLSSELLTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMSRESKIVSPSSLDSLDSERKTES* 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16826589 16830039 - Chy1G013100.1 Chy01g01310 218491

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01310 693 Pfam B3 DNA binding domain 125 226 IPR003340 GO:0003677
Chy01g01310 693 SUPERFAMILY CAD & PB1 domains 578 659 - -
Chy01g01310 693 Pfam AUX/IAA family 629 667 IPR033389 -
Chy01g01310 693 Pfam AUX/IAA family 574 619 IPR033389 -
Chy01g01310 693 MobiDBLite consensus disorder prediction 471 495 - -
Chy01g01310 693 CDD B3_DNA 123 225 IPR003340 GO:0003677
Chy01g01310 693 ProSiteProfiles B3 DNA-binding domain profile. 125 227 IPR003340 GO:0003677
Chy01g01310 693 MobiDBLite consensus disorder prediction 471 488 - -
Chy01g01310 693 Gene3D - 122 227 IPR015300 -
Chy01g01310 693 MobiDBLite consensus disorder prediction 99 120 - -
Chy01g01310 693 MobiDBLite consensus disorder prediction 669 693 - -
Chy01g01310 693 Gene3D - 579 671 - -
Chy01g01310 693 PANTHER AUXIN RESPONSE FACTOR 11 10 681 - -
Chy01g01310 693 SUPERFAMILY DNA-binding pseudobarrel domain 116 254 IPR015300 -
Chy01g01310 693 ProSiteProfiles PB1 domain profile. 583 675 IPR000270 GO:0005515
Chy01g01310 693 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 10 681 IPR044835 GO:0003677|GO:0006355|GO:0009725
Chy01g01310 693 SMART B3_2 125 227 IPR003340 GO:0003677
Chy01g01310 693 Pfam Auxin response factor 251 330 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Chy01g01310 693 Gene3D - 287 358 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01310 K14486 K14486, ARF; auxin response factor - csv:101205805 1361.28
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01310 Chy-Chr1:16826589 Chy07g01133 Chy-Chr7:16265895 0 dispersed
Chy01g01310 Chy-Chr1:16826589 Chy11g01328 Chy-Chr11:19476458 1.48E-22 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy10g01117 CCT,ECH 16 345 B3 DNA Binding Superfamily AT1G25560 63.0 5.1e-109 391.3
Chy09g00618 CCT,ECH 34 303 B3 DNA Binding Superfamily AT1G25560 63.2 8.1e-91 330.9
Chy04g01900 . 41 162 B3 DNA Binding Superfamily AT1G25560 64.8 2.5e-39 159.8
Chy09g01354 . 32 140 B3 DNA Binding Superfamily AT1G25560 66.1 5.2e-37 152.1
Chy11g01776 . 18 133 B3 DNA Binding Superfamily AT1G25560 62.1 6.8e-37 151.8
Chy09g01354 . 31 145 B3 DNA Binding Superfamily AT1G01030 83.6 2.1e-53 206.5
Chy11g01776 . 17 127 B3 DNA Binding Superfamily AT1G01030 80.2 1.4e-49 193.7
Chy10g01117 CCT,ECH 179 287 B3 DNA Binding Superfamily AT1G01030 67.0 9.7e-38 154.5
Chy11g00813 . 4 688 B3 DNA Binding Superfamily AT4G30080 57.5 1.7e-211 732.6
Chy03g00953 . 1 684 B3 DNA Binding Superfamily AT4G30080 54.8 9.2e-197 683.7
Chy08g00839 . 14 371 B3 DNA Binding Superfamily AT4G30080 69.1 3.4e-143 505.8
Chy11g00424 . 44 388 B3 DNA Binding Superfamily AT3G18990 56.8 1.3e-94 343.6
Chy02g00116 . 23 383 B3 DNA Binding Superfamily AT1G59750 55.6 1.0e-107 387.9
Chy05g00847 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.7 1.3e-107 387.5
Chy12g00362 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.4 2.1e-105 380.2
Chy05g01480 CCT 23 358 B3 DNA Binding Superfamily AT1G59750 54.4 1.3e-102 370.9
Chy04g00433 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 3.0e-99 359.8
Chy11g00813 . 3 688 B3 DNA Binding Superfamily AT2G28350 58.3 2.9e-211 731.9
Chy03g00953 . 9 681 B3 DNA Binding Superfamily AT2G28350 50.1 2.3e-171 599.4
Chy08g00839 . 13 371 B3 DNA Binding Superfamily AT2G28350 65.8 4.8e-137 485.3
Chy01g01310 . 14 691 B3 DNA Binding Superfamily AT2G46530 54.9 5.7e-185 644.4
Chy07g01133 CCT,ECH 19 693 B3 DNA Binding Superfamily AT2G46530 53.7 1.6e-179 626.3
Chy02g00116 . 1 368 B3 DNA Binding Superfamily AT2G46530 51.6 6.9e-98 355.1
Chy12g00362 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.1 7.2e-95 345.1
Chy11g00813 . 4 688 B3 DNA Binding Superfamily AT4G30080 57.5 1.7e-211 732.6
Chy03g00953 . 1 684 B3 DNA Binding Superfamily AT4G30080 54.8 9.2e-197 683.7
Chy08g00839 . 14 371 B3 DNA Binding Superfamily AT4G30080 69.1 3.4e-143 505.8
Chy01g01310 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.8 5.3e-174 607.8
Chy07g01133 CCT,ECH 55 683 B3 DNA Binding Superfamily AT3G61830 52.1 7.1e-163 570.9
Chy02g00116 . 51 364 B3 DNA Binding Superfamily AT3G61830 53.2 7.1e-86 315.1
Chy12g00362 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.4 4.3e-83 305.8
Chy05g01480 CCT 1 1103 B3 DNA Binding Superfamily AT1G19220 63.5 0.0e+00 1186.0
Chy02g02705 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.3e-104 378.3
Chy02g00267 . 46 378 B3 DNA Binding Superfamily AT1G19220 50.7 3.8e-91 333.6
Chy01g01310 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 4.6e-60 228.0
Chy07g01133 CCT,ECH 25 229 B3 DNA Binding Superfamily AT1G43950 56.3 3.0e-59 225.3
Chy02g02705 . 41 246 B3 DNA Binding Superfamily AT1G43950 52.9 4.7e-57 218.0
Chy02g00267 . 148 433 B3 DNA Binding Superfamily AT2G33860 65.5 1.1e-108 390.6
Chy11g01328 . 168 451 B3 DNA Binding Superfamily AT2G33860 58.0 1.0e-90 330.9
Chy02g02705 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 8.4e-77 284.6
Chy02g00116 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 6.9e-71 265.0
Chy12g00362 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 1.2e-70 264.2
Chy05g00847 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 3.8e-69 259.2
Chy05g01480 CCT 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.4e-69 258.5
Chy07g01133 CCT,ECH 130 357 B3 DNA Binding Superfamily AT2G33860 52.4 1.9e-68 256.9
Chy04g00433 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 4.2e-68 255.8
Chy01g01310 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.8 3.9e-66 249.2
Chy11g01328 . 48 798 B3 DNA Binding Superfamily AT5G60450 60.1 2.2e-247 852.0
Chy05g01480 CCT 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 7.7e-99 358.6
Chy04g00433 . 20 940 B3 DNA Binding Superfamily AT1G19850 61.3 1.4e-290 995.7
Chy01g01310 . 20 351 B3 DNA Binding Superfamily AT1G19850 50.4 5.1e-94 342.8
Chy02g00116 . 1 910 B3 DNA Binding Superfamily AT1G30330 71.4 0.0e+00 1194.9
Chy12g00362 . 1 895 B3 DNA Binding Superfamily AT1G30330 71.7 0.0e+00 1165.2
Chy07g01133 CCT,ECH 25 379 B3 DNA Binding Superfamily AT1G30330 51.2 6.5e-100 362.5
Chy01g01310 . 20 352 B3 DNA Binding Superfamily AT1G30330 54.7 1.9e-99 360.9
Chy05g01480 CCT 1 1086 B3 DNA Binding Superfamily AT5G20730 58.3 0.0e+00 1096.6
Chy02g00116 . 4 468 B3 DNA Binding Superfamily AT5G20730 59.5 4.5e-151 532.7
Chy12g00362 . 4 469 B3 DNA Binding Superfamily AT5G20730 59.1 4.5e-151 532.7
Chy02g02705 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.5 2.0e-103 374.4
Chy02g00116 . 97 872 B3 DNA Binding Superfamily AT5G37020 53.9 1.0e-201 700.3
Chy12g00362 . 97 858 B3 DNA Binding Superfamily AT5G37020 50.8 1.3e-188 656.8
Chy05g01480 CCT 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 2.8e-111 399.8
Chy05g00847 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.2 5.9e-109 392.1
Chy07g01133 CCT,ECH 1 696 B3 DNA Binding Superfamily AT4G23980 55.5 5.5e-199 691.0
Chy01g01310 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.1 4.3e-196 681.4
Chy04g00433 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.1 1.7e-96 350.5
Chy02g02705 . 36 834 B3 DNA Binding Superfamily AT5G62000 62.4 1.4e-287 985.7
Chy05g00847 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 8.4e-110 395.2
Chy05g01480 CCT 23 380 B3 DNA Binding Superfamily AT5G62000 54.0 7.3e-106 382.1
Chy05g01480 CCT 1 1103 B3 DNA Binding Superfamily AT1G19220 63.5 0.0e+00 1186.0
Chy02g02705 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.3e-104 378.3
Chy02g00267 . 46 378 B3 DNA Binding Superfamily AT1G19220 50.7 3.8e-91 333.6
Chy04g00433 . 20 940 B3 DNA Binding Superfamily AT1G19850 61.3 1.4e-290 995.7
Chy01g01310 . 20 351 B3 DNA Binding Superfamily AT1G19850 50.4 5.1e-94 342.8
Chy02g00116 . 1 910 B3 DNA Binding Superfamily AT1G30330 71.4 0.0e+00 1194.9
Chy12g00362 . 1 895 B3 DNA Binding Superfamily AT1G30330 71.7 0.0e+00 1165.2
Chy07g01133 CCT,ECH 25 379 B3 DNA Binding Superfamily AT1G30330 51.2 6.5e-100 362.5
Chy01g01310 . 20 352 B3 DNA Binding Superfamily AT1G30330 54.7 1.9e-99 360.9
Chy05g01480 CCT 1 1086 B3 DNA Binding Superfamily AT5G20730 58.3 0.0e+00 1096.6
Chy02g00116 . 4 468 B3 DNA Binding Superfamily AT5G20730 59.5 4.5e-151 532.7
Chy12g00362 . 4 469 B3 DNA Binding Superfamily AT5G20730 59.1 4.5e-151 532.7
Chy02g02705 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.5 2.0e-103 374.4
Chy02g00116 . 97 872 B3 DNA Binding Superfamily AT5G37020 53.9 1.0e-201 700.3
Chy12g00362 . 97 858 B3 DNA Binding Superfamily AT5G37020 50.8 1.3e-188 656.8
Chy05g01480 CCT 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 2.8e-111 399.8
Chy05g00847 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.2 5.9e-109 392.1
Chy02g00267 . 148 433 B3 DNA Binding Superfamily AT2G33860 65.5 1.1e-108 390.6
Chy11g01328 . 168 451 B3 DNA Binding Superfamily AT2G33860 58.0 1.0e-90 330.9
Chy02g02705 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 8.4e-77 284.6
Chy02g00116 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 6.9e-71 265.0
Chy12g00362 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 1.2e-70 264.2
Chy05g00847 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 3.8e-69 259.2
Chy05g01480 CCT 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.4e-69 258.5
Chy07g01133 CCT,ECH 130 357 B3 DNA Binding Superfamily AT2G33860 52.4 1.9e-68 256.9
Chy04g00433 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 4.2e-68 255.8
Chy01g01310 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.8 3.9e-66 249.2
Chy11g01328 . 48 798 B3 DNA Binding Superfamily AT5G60450 60.1 2.2e-247 852.0
Chy05g01480 CCT 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 7.7e-99 358.6
Chy02g00116 . 23 383 B3 DNA Binding Superfamily AT1G59750 55.6 1.0e-107 387.9
Chy05g00847 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.7 1.3e-107 387.5
Chy12g00362 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.4 2.1e-105 380.2
Chy05g01480 CCT 23 358 B3 DNA Binding Superfamily AT1G59750 54.4 1.3e-102 370.9
Chy04g00433 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 3.0e-99 359.8
Chy02g02705 . 36 834 B3 DNA Binding Superfamily AT5G62000 62.4 1.4e-287 985.7
Chy05g00847 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 8.4e-110 395.2
Chy05g01480 CCT 23 380 B3 DNA Binding Superfamily AT5G62000 54.0 7.3e-106 382.1
Chy01g01310 . 14 691 B3 DNA Binding Superfamily AT2G46530 54.9 5.7e-185 644.4
Chy07g01133 CCT,ECH 19 693 B3 DNA Binding Superfamily AT2G46530 53.7 1.6e-179 626.3
Chy02g00116 . 1 368 B3 DNA Binding Superfamily AT2G46530 51.6 6.9e-98 355.1
Chy12g00362 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.1 7.2e-95 345.1
Chy01g01310 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.8 5.3e-174 607.8
Chy07g01133 CCT,ECH 55 683 B3 DNA Binding Superfamily AT3G61830 52.1 7.1e-163 570.9
Chy02g00116 . 51 364 B3 DNA Binding Superfamily AT3G61830 53.2 7.1e-86 315.1
Chy12g00362 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.4 4.3e-83 305.8
Chy07g01133 CCT,ECH 1 696 B3 DNA Binding Superfamily AT4G23980 55.5 5.5e-199 691.0
Chy01g01310 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.1 4.3e-196 681.4
Chy04g00433 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.1 1.7e-96 350.5
Chy01g01310 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 4.6e-60 228.0
Chy07g01133 CCT,ECH 25 229 B3 DNA Binding Superfamily AT1G43950 56.3 3.0e-59 225.3
Chy02g02705 . 41 246 B3 DNA Binding Superfamily AT1G43950 52.9 4.7e-57 218.0
Chy11g00813 . 3 688 B3 DNA Binding Superfamily AT2G28350 58.3 2.9e-211 731.9
Chy03g00953 . 9 681 B3 DNA Binding Superfamily AT2G28350 50.1 2.3e-171 599.4
Chy08g00839 . 13 371 B3 DNA Binding Superfamily AT2G28350 65.8 4.8e-137 485.3
Chy11g00813 . 4 688 B3 DNA Binding Superfamily AT4G30080 57.5 1.7e-211 732.6
Chy03g00953 . 1 684 B3 DNA Binding Superfamily AT4G30080 54.8 9.2e-197 683.7
Chy08g00839 . 14 371 B3 DNA Binding Superfamily AT4G30080 69.1 3.4e-143 505.8
Chy09g01354 . 31 145 B3 DNA Binding Superfamily AT1G01030 83.6 2.1e-53 206.5
Chy11g01776 . 17 127 B3 DNA Binding Superfamily AT1G01030 80.2 1.4e-49 193.7
Chy10g01117 CCT,ECH 179 287 B3 DNA Binding Superfamily AT1G01030 67.0 9.7e-38 154.5
Chy10g01117 CCT,ECH 16 345 B3 DNA Binding Superfamily AT1G25560 63.0 5.1e-109 391.3
Chy09g00618 CCT,ECH 34 303 B3 DNA Binding Superfamily AT1G25560 63.2 8.1e-91 330.9
Chy04g01900 . 41 162 B3 DNA Binding Superfamily AT1G25560 64.8 2.5e-39 159.8
Chy09g01354 . 32 140 B3 DNA Binding Superfamily AT1G25560 66.1 5.2e-37 152.1
Chy11g01776 . 18 133 B3 DNA Binding Superfamily AT1G25560 62.1 6.8e-37 151.8
Chy01g00047 . 21 242 B3 DNA Binding Superfamily AT3G19184 62.9 3.8e-67 251.9
Chy03g01525 . 38 259 B3 DNA Binding Superfamily AT3G19184 55.1 4.8e-54 208.4
Chy03g01523 . 4 227 B3 DNA Binding Superfamily AT3G19184 53.0 9.4e-50 194.1
Chy03g01525 . 83 260 B3 DNA Binding Superfamily AT5G42700 59.4 7.0e-54 207.2
Chy03g01523 . 51 224 B3 DNA Binding Superfamily AT5G42700 52.8 1.2e-45 179.9
Chy01g00047 . 82 237 B3 DNA Binding Superfamily AT5G42700 57.0 2.5e-43 172.2
Chy11g00424 . 44 388 B3 DNA Binding Superfamily AT3G18990 56.8 1.3e-94 343.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000766 2 4 1 1 2 3 5 3 3 3 3 3 5 3 3 5 3 4 5 3 3 3 3 3 3 3 2 5 3 2 94
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17327 PF02362 B3 2.10E-21 CL0405 Chy TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy01g01310 Chy_Chr01 FPKM 0.90133 0.0 0.0 0.0 0.0 0.67298 0.517521 0.0 0.0 0.0