Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01352 ATGGCGATTCTGAAGCTTTTTTCTCTCTGCATTTCCCTCTTCTTATTAATCAGAGCCCCTGTACGATGTGATTCCATACATTTCCCTTCTTCTTCTTCTTCCTCCTCCTCCTCCTCTTCTTTTTCTTCTGATGTTCAGCTTCTTTTGGGAAAGATTAGAGCTTCACTTGAAGGAGACACTCAAAACTTGCTTTTATCTTCATGGAATTACTCTGTTCCTCTTTGTCAATGGAGGGGACTCAAATGGGTCTTCACTACTGGAACCCCACTGGTCTGCAGTGATTCTTCTTCTCCACAATGGTCTAATCTCACTCTGTTCAAAGACCCTTCTCTTCATGTTCTCTCTCTGCAACTTCCATCTGCTAATCTTACTGGTTCGTTGCCTAAGGAGCTTGGTGAGTTCACTATGCTTCAAAGTCTCTATCTAAGTATAAACTCTTTGACTGGAACCATTCCACTTGAACTTGGTTACAGCTCCTCTCTTTCTGATATTGATTTGAGTAGCAATCTCTTAACGGGAGTTCTTCCACCTTCGATCTGGAATCTGTGTGATAAACTTGTTTCTGTCAGACTTCATGGCAATTCTTTATCTGGGTCTCTGCCGGAGCCGGCTTTACCAAACTCCACCTGTAGGACTCTGGAGGCTTTGGATTTAGGCAACAATCAGATTTCAGGTACTTTCCCTGAATTCGTTACTAGATTTCCGGGTCTTAAAGAGCTTGATCTTGGGAAAAATTTGTTGTCTGGACAAATCCCTCAGAGCTTAGGCCAGTTAGAGCTGGAGAAGTTGAACCTTTCAAACAACAATTTCAGTGGAATATTGCCTGTTTTTAGTAACTCAAAATTTGGTGTTGAGGCTTTTGAAGGGAATAGTCCTGGGCTTTGTGGGGAGCCTTTGAAAAGCTGTGCAGTGCCTTCTCATTTGAGTTCAGGCGCCATTGCTGGCCTTGTTATTGGCTTGATGACTGGCACAGTGGTTTTAGCTTCGTTGCTTATTGGTTATATGCAAAACAAGAAGAAGAAGAGTAGTAGTGAGAGTGAAGATGAGATTGATGAAGGAGAAGATGAAGAAAATGGTGGCAGTGTCGGTGCAGGTGGTGAAGGAAAGCTCATTTTATTTGAGGGTGGTGAGAATCTGACATTGGATGATGTCTTGAATGCTACGGGACAAGTTATGGAAAAAACAAGCTATGGCACTATATATAAGGCAAAGCTTGCTGATGGAGGGACCATTGCTCTGAGACTGCTGAGGGAAGGTAGTTGCAAAGACAGAAATTCTTGCTTGTCTGTGATTAAACAATTGGGAAAGATTCGCCATGAGAATTTGATTCCTTTAAGAGCTTTCTATCAAGGAAAGAGAGGAGAAAAGCTCCTCATTTATGACTATCTGTCAATCAGAACTTTACATGATTTTCTACATGAATCTAGGGCAGGAAAACCAGTGTTGAACTGGGCTAGGAGGCACAAGATTGCATTAGGCATTGCCCGCGGATTAGCTCATCTTCACACAGGTCTTGAAGTGCCCATTACACATGGTAACATTAGATCGAAAAATGTGCTTGTGGATGATCACTCCTTTGCAGTGAGACTGACAGAGTTTGGGCTAGACAAGCTAATGATCCCATCTGTAGCTGACGAAATTGTCTCGCTGGCAAAATCAGATGGGTACAAGGCACCGGAGCTGCAACGGATGAAGAAATGCAATTCAAGAACAGATGTGTATGCATTTGGAATCTTATTATTGGAAATTCTGATTGGGAAGAAACCAGGAAAAAGTGGAAGAAATGGAGAGTTTGTGGATCTGCCATCAATAGTGAAAGTGGCAGTTCTGGAGGAGACAACGATGGACGTTTTCGACGTGGAGGTTTTGAAAGGGATTAGAAGTCCAATGGAAGATGGAATTGTTCAGGCATTGAAGCTTGCAATGGGTTGCTGTGCTCCAGTGGCTTCAGTAAGACCTTCCATCGATGAAGTTGTGAAGCAGTTGGAAGAGAACAGACCAAGAAACAGATCTGCTCTATACAGCCCAACAGAAACAAGAAGTGAAAATGGTACACCATTTTGA 2064 42.68 MAILKLFSLCISLFLLIRAPVRCDSIHFPSSSSSSSSSSSFSSDVQLLLGKIRASLEGDTQNLLLSSWNYSVPLCQWRGLKWVFTTGTPLVCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSSNLLTGVLPPSIWNLCDKLVSVRLHGNSLSGSLPEPALPNSTCRTLEALDLGNNQISGTFPEFVTRFPGLKELDLGKNLLSGQIPQSLGQLELEKLNLSNNNFSGILPVFSNSKFGVEAFEGNSPGLCGEPLKSCAVPSHLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKSSSESEDEIDEGEDEENGGSVGAGGEGKLILFEGGENLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLSIRTLHDFLHESRAGKPVLNWARRHKIALGIARGLAHLHTGLEVPITHGNIRSKNVLVDDHSFAVRLTEFGLDKLMIPSVADEIVSLAKSDGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKPGKSGRNGEFVDLPSIVKVAVLEETTMDVFDVEVLKGIRSPMEDGIVQALKLAMGCCAPVASVRPSIDEVVKQLEENRPRNRSALYSPTETRSENGTPF* 688
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17965266 17967862 + Chy1G013520.1 Chy01g01352 218533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01352 687 MobiDBLite consensus disorder prediction 668 687 - -
Chy01g01352 687 Gene3D Ribonuclease Inhibitor 185 304 IPR032675 -
Chy01g01352 687 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Chy01g01352 687 Gene3D Ribonuclease Inhibitor 45 184 IPR032675 -
Chy01g01352 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 26 687 - -
Chy01g01352 687 MobiDBLite consensus disorder prediction 667 687 - -
Chy01g01352 687 MobiDBLite consensus disorder prediction 341 364 - -
Chy01g01352 687 PANTHER KINASE-LIKE PROTEIN TMKL1-RELATED 26 687 - -
Chy01g01352 687 Pfam Protein tyrosine and serine/threonine kinase 390 662 IPR001245 GO:0004672|GO:0006468
Chy01g01352 687 SUPERFAMILY Protein kinase-like (PK-like) 392 663 IPR011009 -
Chy01g01352 687 ProSiteProfiles Protein kinase domain profile. 386 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01352 687 Gene3D Phosphorylase Kinase; domain 1 372 462 - -
Chy01g01352 687 Gene3D Transferase(Phosphotransferase) domain 1 465 680 - -
Chy01g01352 687 SUPERFAMILY L domain-like 61 277 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01352 Chy-Chr1:17965266 Chy06g01346 Chy-Chr6:13079193 2.80E-86 dispersed
Chy07g01379 Chy-Chr7:18431905 Chy01g01352 Chy-Chr1:17965266 6.48E-64 dispersed
Chy09g01029 Chy-Chr9:12821454 Chy01g01352 Chy-Chr1:17965266 1.19E-52 dispersed
Chy01g01352 Chy-Chr1:17965266 Chy04g02286 Chy-Chr4:27406963 1.89E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70994 PF07714 PK_Tyr_Ser-Thr 4.00E-25 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01352 - - csv:101203796 1264.21