Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01413 ATGAACCATGTGAGGGATCAACAACAAGAAATTCCTCAATTACATTTTCAAAATTTGGAAGTCGTCACGGCTCTCGGCCGTGGAGCCAAAGGAGTCGTCTTCTTGGCTCGAAACCCCACGGAGGATGACGGCGAATGGTTGGCCTTGAAGGTGATTTCGAGGGAATTAATCGAGAGGAAGGCCAAGATTGTCAATAACGATGGAGCTGAGTATCGGAGAGTTTGCTTTGAACGAGAAGTCTTGCGGCTTTTCCGGCATCCGCTTTTACCTCGATTGCAAGGAGTTTTGGATACTCAGAAAGTTGTAGGCTACGCCATTGATTATTGTAATGGACGAGATCTAAATGCTCTTAGGAAAAAACAGACGGAAAAAATGTTCTCCGATGACGTAATTAGATTTTACGCAGCGGAATTAGTCATGGCGTTGGAGTATGTACACAGTTTAGGAATAGTTTATAGAGATTTGAAGCCTGAGAATGTTATGGTTCAACATAACGGCCATATAATGCTTGTGGATTTTGATCTCTCTACAAGACTCTCTCAAAGATCTCCCAAATCGTCTCCGTCGCCGGCGGCGGAGGTTTTGACGGAATCTAAATTTGTGGTAGAAGATAAGAACAGCAAGAAGAGGAAGAAGAAGAAGCGATTCTTTCATTTTCACCGGTTCTGCAACTCCGGCGTATCACCGGAAGAATCCGATCAGCAGGCTACGGCGACGGAGAAACCAAGATCGCCGGGGGAGTCGGAATCGGAGTCGTCAGAGAAGTCGAACTCGTTCGTGGGGACAGAGGACTACGTGGCACCGGAGATCGTAGCCGGGAAGGGACATGACTTCGCGGTGGACTGGTGGTCACTGGGCGTAGTTTTATACGAGATGCTGTACGGAACGACGCCGTTTAGGGGAACGAATCGAAAGGAAACGTTTTACCGGATTCTGACGAAAACGCCGGATCTTTGCGGGGAAGCGACGGCGTTGAGGGATTTGATCAGGAAGTTGCTGGAGAAAGATCCTGGGAAGAGGATTGAAGTGGAGGAAATAAAAAGGCATGATTTCTTCAAAGGAATAGAGTGGGATATGGTTCTTGAAATTGAGAGGCCGCCGTCGCTGCCGGAAATGGGGGAGGAGGAGAGAAATGGAGAAAAGTTAATAGATGTGGAATCATTTGTGGAAAACGTATTTTGCAGCGAAATAGAGAAGAAGAATCAAATTAAGGGTGGTGGTGGTGAAGGAAAAGGGTTAATTCCTAATTATACGGATTCTGACATATTTCATGTATTCTAA 1281 46.21 MNHVRDQQQEIPQLHFQNLEVVTALGRGAKGVVFLARNPTEDDGEWLALKVISRELIERKAKIVNNDGAEYRRVCFEREVLRLFRHPLLPRLQGVLDTQKVVGYAIDYCNGRDLNALRKKQTEKMFSDDVIRFYAAELVMALEYVHSLGIVYRDLKPENVMVQHNGHIMLVDFDLSTRLSQRSPKSSPSPAAEVLTESKFVVEDKNSKKRKKKKRFFHFHRFCNSGVSPEESDQQATATEKPRSPGESESESSEKSNSFVGTEDYVAPEIVAGKGHDFAVDWWSLGVVLYEMLYGTTPFRGTNRKETFYRILTKTPDLCGEATALRDLIRKLLEKDPGKRIEVEEIKRHDFFKGIEWDMVLEIERPPSLPEMGEEERNGEKLIDVESFVENVFCSEIEKKNQIKGGGGEGKGLIPNYTDSDIFHVF* 427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19406602 19408000 - Chy1G014130.1 Chy01g01413 218594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01413 426 Gene3D Phosphorylase Kinase; domain 1 18 112 - -
Chy01g01413 426 Gene3D Transferase(Phosphotransferase) domain 1 251 371 - -
Chy01g01413 426 MobiDBLite consensus disorder prediction 226 259 - -
Chy01g01413 426 SUPERFAMILY Protein kinase-like (PK-like) 17 371 IPR011009 -
Chy01g01413 426 Pfam Protein kinase domain 20 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01413 426 Pfam Protein kinase domain 251 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01413 426 PANTHER FLIPPASE KINASE 1-RELATED 6 398 - -
Chy01g01413 426 ProSiteProfiles Protein kinase domain profile. 19 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01413 426 SMART serkin_6 19 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01413 426 Gene3D Transferase(Phosphotransferase) domain 1 113 182 - -
Chy01g01413 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Chy01g01413 426 PANTHER RHO-ASSOCIATED PROTEIN KINASE 1/2-RELATED 6 398 - -
Chy01g01413 426 MobiDBLite consensus disorder prediction 227 243 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01413 Chy-Chr1:19406602 Chy05g00118 Chy-Chr5:899509 1.64E-96 dispersed
Chy01g01413 Chy-Chr1:19406602 Chy08g00920 Chy-Chr8:16632692 1.73E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
70996 PF00069 Pkinase 7.50E-30 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01413 K20714 - csv:101223223 768.844