Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01422 ATGTCTCGAACACCAAATTATGAGTTCCAAGAATGGTGGAACAAACAGAGAGAAAGGAACCATGATGAACACTTACTGGAAAAGTCTGACTATTTATCGACCTCACCTGCATTTCTCTCTGTTGAGATCCGGAGTTCTGGAAGCCCTGGAGGTCGGATGGTTGATAAGGACCGGGCAAGGACCAGGAGTGCCCGTCAGATTTCTTGGGTTTGGTTGTTGAAATTCCAGCAGATCGCTGGTTCATTGGCTTCAATCACCAATGGGGTCGTTTATCTAATCCGCACTGCTAATCGTCGGATCTCATCGCCCGATTCTCCAGCTGATTCGGCATCGTCTCGGCTTTACAGGATTATCAAAGTGTTTTTGATTGTAGTGCTTCTATTGCTTGTTTTTGAGCTCGTGGCATACTTCAATGGCTGGCATTTCAGCCCCCCTTCTGTGAGTTCCGCTTCTGCGGAGGTGCTTGGAATGATAGGGTTTCTCTATGCTAATTGGCTTCAGATTCGAGCAAATTACCTGGCTCCACCGTTGCAGTACTTGACCAATCTCTGCATTGTGTTGTTCCTGATCCAGTCAGTGGACCGTTTGCTTTTAATGTTTGGGTGTTTTTGGATCAAGTTCAGGCGATTGAAGCCCGTAGCGGCATTTGAGTATTCTTCCTCGGACGAAAATGCTGCTAGTCCTGAGGATTATCCAATGGTATTGGTGCAGATTCCCATGTGCAATGAGAGGGAGGTTTATCAACAATCTATCGCAGCTGTTTGTATCCAGGACTGGCCAAAGGATAAAATGCTTGTACAGGTTTTAGATGATTCTGATGAGCTAGATGTTCAACAACTTATCAAGGCTGAAGTACAAAAATGGCAACAGAGAGGTGTCCGTATATTGTATAGACACCGTCTCATACGTACAGGCTACAAGGCAGGGAATCTCAAATCTGCAATGGGGTGTGATTATGTAAAAGATTATGAGTTTGTGGCAATCTTTGATGCAGATTTTCAACCAGGACCAGACTTTTTAAAGAAAACTATTCCACATTTTAAGGGGAATGATGAACTTGCATTGGTCCAAACGAGGTGGTCATTTGTGAACAAGGACGAAAACTTACTCACAAGATTGCAGAACATTAATTTGTCCTTCCATTTTGAGGTTGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGAACTGCTGGAGTCTGGAGAATCAAAGCTTTGGAAGAATGTGGGGGCTGGTTAGAAAGAACAACTGTCGAGGACATGGATGTTGCAGTTCGTGCCCATCTTTGTGGCTGGAAGTTCATATATCTAAATGATGTAAAGTGCCTTTGTGAGCTTCCAGAATCATATGAAGCATACAAGAAACAACAACACCGCTGGCATTCAGGCCCTATGCAGTTATTTCGTTTGTGCTTCTCTGACATACTCAAATCAAAGGTGAGTTGGAAGAAGAAAGCTAATTTGATTTTTCTTTTCTTCCTCTTGCGAAAGCTTGTCCTTCCCTTCTATTCCTTTACCTTGTTCTGCATAATTCTCCCCCTCACCATGTTCCTTCCAGAAGCTCATCTACCAGCTTGGGTTGTATGCTATGTTCCCGGAATCATGTCCATCCTAAATATCCTTCCTGCACCACGATCGTTTCCATTTCTAGTCCCCTATCTTCTGTTTGAAAACACCATGTCTGTTACCAAATTCAATGCCATGATATCAGGGTTATTCCGCTTTGGAAGTTCATATGAATGGATCGTAACGAAAAAACTAGGAAGATCATCTGAAAACAATCTTGTTGCTTTCGAAAAAGAACTAGAACCTCTAGTTGAGGGTACAAGTCTTCATCGATCTTCGTCAGAATCCGGCCTTCAGGAACTGACCAAGCTCGAGATATCGAAAAAAGCAGGGAAACATAAAAGAAATCGTCTGTATAGGAAAGAATTGGCTCTTGCGTTCATTTTGTTAACCGCCTCAGCAAGAAGTCTGTTATCTGCTCAAGGAATTCACTTCTACTTTCTATTATTTCAAGGTATCACTTTTCTAGTTGTTGGTCTCGATTTAATTGGAGAGCAGGTCAGTTAA 2085 42.59 MSRTPNYEFQEWWNKQRERNHDEHLLEKSDYLSTSPAFLSVEIRSSGSPGGRMVDKDRARTRSARQISWVWLLKFQQIAGSLASITNGVVYLIRTANRRISSPDSPADSASSRLYRIIKVFLIVVLLLLVFELVAYFNGWHFSPPSVSSASAEVLGMIGFLYANWLQIRANYLAPPLQYLTNLCIVLFLIQSVDRLLLMFGCFWIKFRRLKPVAAFEYSSSDENAASPEDYPMVLVQIPMCNEREVYQQSIAAVCIQDWPKDKMLVQVLDDSDELDVQQLIKAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKSKVSWKKKANLIFLFFLLRKLVLPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGIMSILNILPAPRSFPFLVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSENNLVAFEKELEPLVEGTSLHRSSSESGLQELTKLEISKKAGKHKRNRLYRKELALAFILLTASARSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVS* 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 19725249 19731223 + Chy1G014220.1 Chy01g01422 218603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01422 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 450 IPR029044 -
Chy01g01422 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 510 IPR029044 -
Chy01g01422 694 Pfam Glycosyl transferase family group 2 326 531 IPR001173 -
Chy01g01422 694 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 6-RELATED 25 693 - -
Chy01g01422 694 PANTHER - 25 693 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01422 Chy-Chr1:19725249 Chy04g00287 Chy-Chr4:2598661 0 dispersed
Chy01g01422 Chy-Chr1:19725249 Chy07g00213 Chy-Chr7:1721438 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01422 - - csv:101216681 1338.17