Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01423 | ATGGATGAAGATTTTGATATCCCTGCCGCCCCTGACATGGCCGACGACTTGGATCTTCCTGATGAAACCGTTGCTCTCAAGGTTGGTGAGGAGAAAGAGATTGGAAATCAAGGCTTGAAAAAGAAGCTTCTTAAGGAAGGTGAAGGATGGGTTACTCCAGAAAATGGCGATGAGGTTGAAGTTCACTATACTGGAACTTTGCTTGATGGTACTCAGTTTGATTCTAGCCGCGATCGTGGAACCCCGTTCAAGTTCACTCTTGGTCAAGGACAAGTGATTAAAGGATGGGATTTGGGTATCAAAACAATGAAGAAAAATGAAAAAGCTCTTTTTACCATTCCTCCTGATCTGGCATATGGTGAATCTGGCTCCCCACCAACCATTCCTCCTAGTGCGACATTGCAGTTCGATGTTGAGTTACTATCTTGGACAAGCGTTAAGGACATATGTAAGGATGGAGGAATATTCAAGAAGATCCTAACTGAAGGGGACAAATGGGAGAATCCAAAGGACCTTGATGAAGTGCTAGTAAATTTTGAAGCTAAGCTAGAAGATGGAACACTTGTTGCAAAAGCTGATGGAGTGGAATTCACTGTTGCGGATGGTTACTTTTGCCCTTCACTTGCAAAGGCTGTAAAAACCATGAAGTTAGGTGAAAAGGCACTCCTCACGGTGAAGCCACAATATGGGTTCGGGGAGAAAGGTAAATCTGCCTGTGGCAATGAAGGTGCAGTTCCACCAAATGCATCTCTCGATATTACTTTAGAGTTGGTATCTTGGAAGACTGTTTCAGAAGTTACCCCTGACAAGAAGGTCATCAAGAAAATTCTGAAAGAAGGAGAAGGTTATGAGAAGCCAAATGATGGAGCCATCGTCAAAGTGAAATTGATAGGGAAGTTGGGAGATGGCAAGATATTTTTGAGGAAGGGCCACGATAATGGTGAAGAGCCATATGAGTTCAAAACAGACGAAGAACAAGTGATTGATGGTATCGACAAAGCTGTGGTGACTATGAAGAAAGGTGAGATAGCCCTGCTGACAATAGCACCAGAGTATGCTTTTGGTTCGTCTGAGTCACAACAGGATTTAGCTGTAGTTCCTCCAAACTCAACTGTGTATTACGAGGTTGAGCTGGTGGCTTTTGACAAGGAGAAAGAGTCATGGGATATGAATAACCAGGAAAAGATTGAAGCTGCTGGTAAAAAGAAGGAAGAAGGAAATGTGTTGTTTAAGTCTGGAAAATTTGCTAGAGCTTCCAAGAGATATGAGAAGGCTGTGAAGTTCATTGAATACGATTCTTCATTTAGCGAAGAAGAGAAAAAGCAGGCGAAGGCATTGAAAGTTGCATGCAATTTGAACAATGCAGCGTGTAAATTGAAGCTAAAGCTGTACAACGAGGCAGAGAAATTGTGCACTAAGGTACTGGAACTTGAGAGTTCGAATGTCAAGGCTCTCTATAGAAGGGCTCAAGCATATATCCAACTAGCTGATTTGGACTTGGCTGAATTTGACATAAAGAAGGCTCTTGATATAGATCCGAATAACAGGGATGTGAAATTGGAATACAAAACTCTGAAGGAGAAGGTGAAGGAATACAATAAAAAAGATGCCAAGTTTTACGGTAACATGTTTGCCAAAATGAAGAAAGTAGAATCTGCATAA | 1662 | 41.88 | MDEDFDIPAAPDMADDLDLPDETVALKVGEEKEIGNQGLKKKLLKEGEGWVTPENGDEVEVHYTGTLLDGTQFDSSRDRGTPFKFTLGQGQVIKGWDLGIKTMKKNEKALFTIPPDLAYGESGSPPTIPPSATLQFDVELLSWTSVKDICKDGGIFKKILTEGDKWENPKDLDEVLVNFEAKLEDGTLVAKADGVEFTVADGYFCPSLAKAVKTMKLGEKALLTVKPQYGFGEKGKSACGNEGAVPPNASLDITLELVSWKTVSEVTPDKKVIKKILKEGEGYEKPNDGAIVKVKLIGKLGDGKIFLRKGHDNGEEPYEFKTDEEQVIDGIDKAVVTMKKGEIALLTIAPEYAFGSSESQQDLAVVPPNSTVYYEVELVAFDKEKESWDMNNQEKIEAAGKKKEEGNVLFKSGKFARASKRYEKAVKFIEYDSSFSEEEKKQAKALKVACNLNNAACKLKLKLYNEAEKLCTKVLELESSNVKALYRRAQAYIQLADLDLAEFDIKKALDIDPNNRDVKLEYKTLKEKVKEYNKKDAKFYGNMFAKMKKVESA* | 554 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 19733043 | 19737043 | - | Chy1G014230.1 | Chy01g01423 | 218604 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01423 | 553 | Pfam | Tetratricopeptide repeat | 482 | 515 | IPR001440 | GO:0005515 | |
Chy01g01423 | 553 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 272 | 380 | - | - | |
Chy01g01423 | 553 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 381 | 552 | - | - | |
Chy01g01423 | 553 | PANTHER | PEPTIDYLPROLYL ISOMERASE | 1 | 268 | - | - | |
Chy01g01423 | 553 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 167 | 257 | IPR001179 | GO:0003755 | |
Chy01g01423 | 553 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 283 | 379 | IPR001179 | GO:0003755 | |
Chy01g01423 | 553 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 51 | 141 | IPR001179 | GO:0003755 | |
Chy01g01423 | 553 | ProSiteProfiles | TPR repeat profile. | 482 | 515 | IPR019734 | GO:0005515 | |
Chy01g01423 | 553 | Gene3D | Tetratricopeptide repeat domain | 385 | 542 | IPR011990 | GO:0005515 | |
Chy01g01423 | 553 | SMART | tpr_5 | 399 | 432 | IPR019734 | GO:0005515 | |
Chy01g01423 | 553 | SMART | tpr_5 | 448 | 481 | IPR019734 | GO:0005515 | |
Chy01g01423 | 553 | SMART | tpr_5 | 482 | 515 | IPR019734 | GO:0005515 | |
Chy01g01423 | 553 | Gene3D | - | 148 | 261 | IPR046357 | GO:0003755 | |
Chy01g01423 | 553 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 289 | 382 | IPR001179 | GO:0003755 | |
Chy01g01423 | 553 | Gene3D | - | 262 | 383 | IPR046357 | GO:0003755 | |
Chy01g01423 | 553 | Gene3D | - | 31 | 147 | IPR046357 | GO:0003755 | |
Chy01g01423 | 553 | SUPERFAMILY | FKBP-like | 148 | 264 | - | - | |
Chy01g01423 | 553 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 272 | 380 | - | - | |
Chy01g01423 | 553 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 381 | 552 | - | - | |
Chy01g01423 | 553 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 1 | 268 | - | - | |
Chy01g01423 | 553 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 172 | 261 | IPR001179 | GO:0003755 | |
Chy01g01423 | 553 | SUPERFAMILY | FKBP-like | 33 | 148 | - | - | |
Chy01g01423 | 553 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 56 | 144 | IPR001179 | GO:0003755 | |
Chy01g01423 | 553 | SUPERFAMILY | TPR-like | 387 | 547 | IPR011990 | GO:0005515 | |
Chy01g01423 | 553 | SUPERFAMILY | FKBP-like | 264 | 399 | - | - | |
Chy01g01423 | 553 | Coils | Coil | 515 | 535 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01423 | Chy-Chr1:19733043 | Chy06g00818 | Chy-Chr6:5733954 | 0 | dispersed | |
Chy11g01028 | Chy-Chr11:14647236 | Chy01g01423 | Chy-Chr1:19733043 | 9.08E-12 | dispersed | |
Chy01g01423 | Chy-Chr1:19733043 | Chy01g01424 | Chy-Chr1:19740005 | 1.23E-26 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01423 | K09571 | - | csv:101214513 | 1026.93 |