Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01470 ATGGTTGTTGATGGCGCTGACAAGCCTGTCAATATTGTTGTTGGTTCTCAAATATGGGTGGGAGATATAGATTCTGTTTGGATTGATGGACTCGTACTGAACATCAATGGAGAAGATGCTGAGATTCAAACTAGTGATGGGAGGCAGGTGGTTGTAAAAATGTCAAATCTTTATCCAAGGGACGCAGAAGCTCCTGCTACAGGAATTGACGACATGACAAGAATGTCATATTTGAATGAGCCTGGGTTGCTGCATAATTTGGCAATCAGATATGCAATAAATGAAATTTATACTTATACTGGAAACATTCTTATTGCCATCAACCCATTCCAAAGCATTTCAAGTCTGTATGATGCCCATGTGATGGAGAAGTACAAGGGGGCACCAATTGGGGAGCTGAAGCCGCATGTTTTCGCAATTGCTGATGTTGCATATAGGGCTATGATAAATTATGGGAAAAGCAATTCCATTCTGGTAAGTGGTGAAAGTGGGGCCGGTAAGACTGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCCATGCTGCATCTGAAGGACGAACTGTTGAACAACAAGTTCTAGAATCGAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTGAGAAACAATAATTCAAGCCGGTTTGGGAAATTTGTTGAGATCCAATTCGACAAGAAGGGGAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGGGTTTGTCAAATATCAGACCCTGAGCGCAATTATCATTGCTTTTACCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGATATAAGCTGGGAAATCCAAAATCATTTCACTATCTAAACCAATCAAATTGTTATGAACTGGCTGGTGTGAATGATGCCCATGATTATCTTGCGACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCAATTCTCCATCTGGGTAATATTGAATTTGCAAAAGGAGAAGAGTCTGATTCATCATTTGTAAAAGATGAAGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGATCCCAATGCATTAGAAGATGCTCTTTGCAAGCGCATGATGGTTACACCGGAGGAAGTCATCAAGAGAAGTCTTGATCCACATGGTGCAACAGTTAGCAGGGATGGATTAGCCAAGACAATATACTCTCGTTTGTTTGACTGGTTGGTAGATAAAATCAATGTATCCATCGGACAAGATCCTTGCTCAAAGTATCTGATCGGAGTACTTGATATTTATGGTTTTGAGAGCTTTCAAACAAATAGTTTTGAGCAATTCTGCATCAATTACACAAATGAAAAGCTGCAGCAACATTTCAACCAGCACGTATTCAAGATGGAGCAAGAAGAATATGTAAAAGAGGAAATTGATTGGAGCTACATTGAGTTTATTGATAATCAAGATGTCCTTGATCTGATTGAGAAGAAGCCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGCATGTTCCCAAAATCAAATCATGAAACATTTTCACAAAAGCTATATCAGACCTTCAAAAATCATAAACGCTTCACCAAGCCAAAATTGGCCCGCTCAGATTTTACGATTGTTCATTATGCTGGAGATGTTCTATATCAGTCAGATCAGTTTCTAGACAAAAATAAAGATTATGTTGTCTCTGAACATCAAGATTTGTTAAGTGCTTCAAAATGTGCTTTTGTCGGTGGTCTCTTCTCTCCTCATCCTGAGGAGACGGCCAAATCATCAAAGTTTTCTTCAATTGGCTCTCGTTTTAAGTTACAACTACAGCAGTTGATGGAAACGTTAAATTCAACCCAACCCCACTATATAAGATGCGTGAAGCCCAATACTGTTCTACAACCAGCCATCTTTGAGAATGCTACTGTCATGCAACAATTACGCTCTGGAGGCGTTTTGGAGGCAATTAGAATCAAATGTGCAGGATACCCTACTCATAGAACATTTTCCGAATTTTTATCTCGATTCGGAATTCTTGCACCCGAGGTATTGGAAGGGGACTATGAAGAGAAGGTAGCGTGCGAAAAGATTCTAGAGAAGATGGGACTTAAAGGTTATCTGATAGGGCAATCAAAAATTTTCCTGAGAGGTAATTTGATGGCCGAACTAGATGCACGAAGAACAGGAATACATTGTGCCGCTGCTGTAGTTATACAGAAGCATGCCAGAGCTCGAGTTGATCTTAGAAAGTACATTGCCATGCGAAGAGCTTGCATTCGTCTACAGTCGTATTGGAGAGGTGTTCTTGCCCGGGAGTCATATGAAATTAGAAGAAGGGAAGCAGCTGCCATCAAAATTCAAAAGATTATCCGTGCATACCTTGCCAGGAACCTCCATGTTAAAACGAGGATCTCAACAGTTGTTATTCAGGCTGGTATGCGTGCCATGGTTGCTCGGAGTGCATACAGACATACAAGGCAGGTTAAGGCTGTGAACGTTATTCAATCTTATTGGCGTCAGTATAGAACCTCGCCGAAGTATAATACAGTTAGAAAATCATCAACCAGTTCACAATGTGGATCAAACTCAAAAACTTCTGGTGAAGGTCTTAAGAAGCAAAGGATGACTAACTTGGAAGAAACAGAGGAGGATCTGGTTTTGCCGACATTGCTCGACAACGGTAGAGACACCATTGATGAAACAATTGAAATGATTGCCAAGGAAAGCTGTGTTTCTCCACAGGAAATAGAAGAAGCATACTTTATTGTTAAAGAACCCAGTAGTCCGGTTAAAGATGCAGATAAAGTGGCCACTCTCAGAGCAGAAGTGGCTAATCTAAAGGCCATGCTGATGGCTGAAAGGCAAAGAGCTAATGAGTGTGAAAGGAATTATGTTGTAACGCAGAAAGCAAATGAGGAAGGACGTAAAAAACTAAAAGAAACAGAAAGGAAAGTACGTCAACTTCAGGACTACATAAACAGGATGATACATTGCATGTCAAACCAAATCTCGGAGATGAAAATGATCGTGGGTACTTCTAGTTCAGATGCATCTAATTCTTTTCTGAACGAGGTTTTGACAGATGCCACATCTAGTTGCTCTGATTCATCATCAGAAGACTTCACCTTTCCTGTTCCAAGTTCATCTGTGCCAACTTTCTCTTCATTCGGTACCAACACTTTTCAGCTGATTGTGCAGGATATTTCAGCAGCAGAAATTCCAGGATCTGAAAGTGACAGGGAAGGAGGATTCTCTGACTACTTCTAA 3294 40.74 MVVDGADKPVNIVVGSQIWVGDIDSVWIDGLVLNINGEDAEIQTSDGRQVVVKMSNLYPRDAEAPATGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISSLYDAHVMEKYKGAPIGELKPHVFAIADVAYRAMINYGKSNSILVSGESGAGKTETTKMLMCYLAFLGGHAASEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNIEFAKGEESDSSFVKDEESKFHLHMTAELLMCDPNALEDALCKRMMVTPEEVIKRSLDPHGATVSRDGLAKTIYSRLFDWLVDKINVSIGQDPCSKYLIGVLDIYGFESFQTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSNHETFSQKLYQTFKNHKRFTKPKLARSDFTIVHYAGDVLYQSDQFLDKNKDYVVSEHQDLLSASKCAFVGGLFSPHPEETAKSSKFSSIGSRFKLQLQQLMETLNSTQPHYIRCVKPNTVLQPAIFENATVMQQLRSGGVLEAIRIKCAGYPTHRTFSEFLSRFGILAPEVLEGDYEEKVACEKILEKMGLKGYLIGQSKIFLRGNLMAELDARRTGIHCAAAVVIQKHARARVDLRKYIAMRRACIRLQSYWRGVLARESYEIRRREAAAIKIQKIIRAYLARNLHVKTRISTVVIQAGMRAMVARSAYRHTRQVKAVNVIQSYWRQYRTSPKYNTVRKSSTSSQCGSNSKTSGEGLKKQRMTNLEETEEDLVLPTLLDNGRDTIDETIEMIAKESCVSPQEIEEAYFIVKEPSSPVKDADKVATLRAEVANLKAMLMAERQRANECERNYVVTQKANEEGRKKLKETERKVRQLQDYINRMIHCMSNQISEMKMIVGTSSSDASNSFLNEVLTDATSSCSDSSSEDFTFPVPSSSVPTFSSFGTNTFQLIVQDISAAEIPGSESDREGGFSDYF* 1098
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 20409567 20436672 + Chy1G014700.1 Chy01g01470 218651
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01470 1097 Gene3D - 257 315 - -
Chy01g01470 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 860 IPR027417 -
Chy01g01470 1097 ProSiteProfiles IQ motif profile. 811 839 IPR000048 GO:0005515
Chy01g01470 1097 SMART iq_5 810 832 IPR000048 GO:0005515
Chy01g01470 1097 SMART iq_5 787 809 IPR000048 GO:0005515
Chy01g01470 1097 SMART iq_5 739 761 IPR000048 GO:0005515
Chy01g01470 1097 SMART iq_5 762 784 IPR000048 GO:0005515
Chy01g01470 1097 SMART iq_5 835 857 IPR000048 GO:0005515
Chy01g01470 1097 Gene3D Kinesin motor domain 70 667 IPR036961 -
Chy01g01470 1097 Gene3D - 672 738 - -
Chy01g01470 1097 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 13 62 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 Pfam IQ calmodulin-binding motif 814 832 IPR000048 GO:0005515
Chy01g01470 1097 Pfam IQ calmodulin-binding motif 764 783 IPR000048 GO:0005515
Chy01g01470 1097 Pfam IQ calmodulin-binding motif 790 806 IPR000048 GO:0005515
Chy01g01470 1097 MobiDBLite consensus disorder prediction 858 881 - -
Chy01g01470 1097 SMART MYSc_2a 61 738 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 Gene3D - 790 840 - -
Chy01g01470 1097 Gene3D - 740 789 - -
Chy01g01470 1097 Pfam Myosin head (motor domain) 70 725 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 Gene3D - 444 628 - -
Chy01g01470 1097 CDD MYSc_Myo11 81 725 IPR036018 -
Chy01g01470 1097 Gene3D Myosin VI head, motor domain, U50 subdomain 317 606 - -
Chy01g01470 1097 ProSiteProfiles IQ motif profile. 763 792 IPR000048 GO:0005515
Chy01g01470 1097 PRINTS Myosin heavy chain signature 154 179 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 PRINTS Myosin heavy chain signature 487 515 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 PRINTS Myosin heavy chain signature 97 116 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 PRINTS Myosin heavy chain signature 201 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 PRINTS Myosin heavy chain signature 434 462 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 ProSiteProfiles IQ motif profile. 788 815 IPR000048 GO:0005515
Chy01g01470 1097 ProSiteProfiles Myosin motor domain profile. 67 737 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy01g01470 1097 Coils Coil 945 972 - -
Chy01g01470 1097 PANTHER MYOSIN 10 1077 - -
Chy01g01470 1097 Coils Coil 980 1000 - -
Chy01g01470 1097 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 10 1077 - -
Chy01g01470 1097 MobiDBLite consensus disorder prediction 858 882 - -
Chy01g01470 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 790 IPR027417 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01470 Chy-Chr1:20409567 Chy05g01222 Chy-Chr5:16631061 0 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01470 K10357 - csv:101220626 2092.78