Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01478 | ATGGATTCGGCGAGGAGTTGGTTTAATCAGCGTAGAGATAGGTTGAGGGGTTCTACAAAGAAGAAGGATAATAGTATGGGAGAGAATGAGGATTCTACTGCTACTGATCAAATGGATGAGGAAGCGCTTTCTAATATCACTAAGCAGAAGGAACGTCTGCAGAAGAGGAGGGAGCGCATGAGGATTAGAAACAAAGAGCTACAGGCTGCAGCCATCAAGCCAGCATTTGATGGATATAGCTACTCTGAAGTTGAAATTCCAGTACGAAATGTATTGGAAAAGAAGTTGGCTGATGCTGATGTATCTGAAGAAGATCAAAATAATCTACTGAAGTTCTTAGAGAAGAAGGAAACTGAATACATGCGCCTCCAAAGGCACAAAATGGGAGTTGATGATTTCGATTTACTAACAATTATTGGCAAAGGTGCTTTTGGGGAGGTTCGTGTTTGTAGAGAGAAGACTACAGGTCAGGTGTATGCTATGAAAAAGCTTAAAAAATCAGAGATGCTTCGAAGGGGCCAGGTAGAACATGTGAGAGCTGAAAGAAATCTGCTTGCTGAAGTAGACAGCAATTGTATTGTGAAACTCTATTGTTCGTTTCAAGATGATGAGTTTCTTTATCTTATTATGGAGTACCTACCTGGTGGAGATATGATGACTTTATTGATGAGAAAGGATACTTTGACTGAAGATGAAGCGAGGTTTTATGTTGGAGAGATAGTTTTGGCTATTGAATCTATTCATAAGCACAATTACATTCATAGAGATATTAAGCCTGACAACTTGCTGCTTGATAAATTTGGGCACTTGAGACTCTCAGACTTTGGATTATGCAAACCATTAGATTGCAGTATACTCCGGGAACAAGATTTTGATATAGGGAGTACCCGTAATGGAGCTGGGCAAAATGATGAACGCAATGCAACTCCTCGTACTCAACAAGAGCAACTACAACATTGGCAGAAGAATCGAAGAATGCTTGCTTATTCAACAGTTGGAACCCCCGATTATATTGCTCCAGAGGTTTTGTTGAAGAAGGGTTATGGCATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGCTTGTTGGTTATCCACCTTTTTACTCTGATGATCCAATGTCGACTTGTCGGAAGATAGTGAACTGGAGAACTCATTTGAAGTTCCCTGACGAGGCAAAGCTATCCCTCTTGGCAAAAGATCTCATTAGTAAACTACTATGCAATGTTAACCAGAGGCTCGGTACAAATGGCGCGGATGAAATTAAGGTTCATTCGTGGTTTGAAGGCACTGAATGGGATAGGCTATACCAAATGGAAGCTGCATTTGTTCCTGAGGTTAAAGATGAGCTAGACACTCAAAATTTTGAAAAGTTTGAAGAGTCTGACTCGCAAAGCAGTACTTCATCTAAAACTGGACCATGGAGAAAGATGCTTTCATCGAAGGACATCAACTTTGTTGGATACACTTATAAAAACTTCGAAATTGTCAACGATTATCAATTGCCTGGGATGGCTGAATTGAAGAAGAAATGCAGCAAACCAAAAAGACCGTCAATAAAATCACTCTTTGATGGCGAGTTGGAGGAAGGTGACGCATCTGATACACCTAGTCATAGTCACCAGCAAACTGGAGGAAGCTTTTCGAACTCAATGACATCTCCTAAAATGGATGATGTTGATATGAGAAAAGAGTCGATGTAA | 1713 | 40.4 | MDSARSWFNQRRDRLRGSTKKKDNSMGENEDSTATDQMDEEALSNITKQKERLQKRRERMRIRNKELQAAAIKPAFDGYSYSEVEIPVRNVLEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFDLLTIIGKGAFGEVRVCREKTTGQVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEFLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGEIVLAIESIHKHNYIHRDIKPDNLLLDKFGHLRLSDFGLCKPLDCSILREQDFDIGSTRNGAGQNDERNATPRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWRTHLKFPDEAKLSLLAKDLISKLLCNVNQRLGTNGADEIKVHSWFEGTEWDRLYQMEAAFVPEVKDELDTQNFEKFEESDSQSSTSSKTGPWRKMLSSKDINFVGYTYKNFEIVNDYQLPGMAELKKKCSKPKRPSIKSLFDGELEEGDASDTPSHSHQQTGGSFSNSMTSPKMDDVDMRKESM* | 571 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 20526090 | 20535700 | - | Chy1G014780.1 | Chy01g01478 | 218659 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01478 | 570 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Chy01g01478 | 570 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 432 | 504 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Chy01g01478 | 570 | SMART | pkinase_C_6 | 432 | 496 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Chy01g01478 | 570 | SUPERFAMILY | Protein kinase-like (PK-like) | 106 | 484 | IPR011009 | - | |
Chy01g01478 | 570 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 89 | 536 | - | - | |
Chy01g01478 | 570 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 89 | 536 | - | - | |
Chy01g01478 | 570 | Coils | Coil | 43 | 70 | - | - | |
Chy01g01478 | 570 | ProSitePatterns | Protein kinases ATP-binding region signature. | 139 | 162 | IPR017441 | GO:0005524 | |
Chy01g01478 | 570 | Pfam | Protein kinase C terminal domain | 450 | 494 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Chy01g01478 | 570 | Gene3D | Transferase(Phosphotransferase) domain 1 | 323 | 451 | - | - | |
Chy01g01478 | 570 | Gene3D | Transferase(Phosphotransferase) domain 1 | 217 | 293 | - | - | |
Chy01g01478 | 570 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 252 | 264 | IPR008271 | GO:0004672|GO:0006468 | |
Chy01g01478 | 570 | Gene3D | Phosphorylase Kinase; domain 1 | 104 | 216 | - | - | |
Chy01g01478 | 570 | MobiDBLite | consensus disorder prediction | 519 | 539 | - | - | |
Chy01g01478 | 570 | MobiDBLite | consensus disorder prediction | 519 | 570 | - | - | |
Chy01g01478 | 570 | ProSiteProfiles | Protein kinase domain profile. | 133 | 431 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g01478 | 570 | CDD | STKc_NDR_like | 131 | 495 | - | - | |
Chy01g01478 | 570 | SMART | serkin_6 | 133 | 431 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g01478 | 570 | Pfam | Protein kinase domain | 135 | 431 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g01478 | 570 | MobiDBLite | consensus disorder prediction | 540 | 559 | - | - | |
Chy01g01478 | 570 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01478 | Chy-Chr1:20526090 | Chy05g00316 | Chy-Chr5:3138712 | 0 | dispersed | |
Chy01g01478 | Chy-Chr1:20526090 | Chy02g01246 | Chy-Chr2:9075709 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
70997 | PF00069 | Pkinase | 1.90E-62 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01478 | K08790 | - | csv:101221720 | 1053.51 |