Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy01g01553 | ATGGATTTAGCGAATGGGGGCGAGGCCGGCAAGGCTCTGGTGGCTAATCAAGTAGCTAATATTGTTTCTGGTAAATCTAGCAAGACCCAAGAGAATGATTTGGGTTCAAAGTTGGGGACAGGAAGCAAAAGCAATAGGGATATGGTGTTTCGTGCTGATAAGATTGATTTCAAGAGTTGGGATATTCAGCTGGAGAAGCACTTGAGCAGGGCTTGGTCAAGGGACAGGGAAGTGCCTGCTAAAAAGGAAGAATGGGAGATTGACTTGTCTAAACTTGATATCAGATATGTTAAAGCTCATGGAACTTACGGTACTATTTACAGAGGAAACTATGATGGCAACGATGTTGCAGTGAAAGTGCTTGATTGGGGGGTGGATGGTGTTTCCTCAGTCGCTGAAATCGCTGCTCTTCGAACATCTTTTCGCCAGGAAGTTGCTGTATGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTATGGAGCATCAATGGGGACGTCAAACCTTAAAATCCCTCCCAAAAGCTCATCATTCGACAGTAACCAAACTTTTCCTTCAAGGGCTTGCTGCGTTGTTGTTGAGTATCTTCCAGGTGGAACCCTAAAAAGCTTTTTAATCAAAAATAGGAAAAGGAAACTTGCATTTAAGGTTGTGATTCAACTTGCATTGGATCTTTCTAGAGGTTTGAGTTATCTACACTCCAAAAAGATTGTACACCGTGATATTAAAACAGAGAATGTTCTGCTAGATGCTCAGAAGACTCTGAAAATTGTTGATTTTGGCGTTGCTCGAGTCGAAGCACAGAACCCAAAGGATATGACTGGAGAGACTGGCACCCTTGGTTACATGGCCCCCGAGGTCCTTGATGGTAAGCCTTATAATCGGAAATGTGATGTTTACAGTCTTGGTATATGTTTGTGGGAAACATATTGCTGCGATATGCCTTACCCAGATCTCAGTTTTGCTGAAGTGTCTACTGCAGTTGTGCGGCAGAATTTACGACCAGAAATCCCTAGGTGCTGCCCAAGTTCGTTTGCAAATATCATGAAAAGATGTTGGGATGCAAATCCAGAAAAGCGACCCGACATGGATGAGGTCGTAAAATTGTTGGAAGCCATTGATACAAGTAAAGGGGGTGGCATGATTACTGAAGATCAGATTAGTTGTTTCTGTTTTCGCCCGGCTCGTGGTCCATAA | 1197 | 43.36 | MDLANGGEAGKALVANQVANIVSGKSSKTQENDLGSKLGTGSKSNRDMVFRADKIDFKSWDIQLEKHLSRAWSRDREVPAKKEEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGVDGVSSVAEIAALRTSFRQEVAVWHKLDHPNVAKFYGASMGTSNLKIPPKSSSFDSNQTFPSRACCVVVEYLPGGTLKSFLIKNRKRKLAFKVVIQLALDLSRGLSYLHSKKIVHRDIKTENVLLDAQKTLKIVDFGVARVEAQNPKDMTGETGTLGYMAPEVLDGKPYNRKCDVYSLGICLWETYCCDMPYPDLSFAEVSTAVVRQNLRPEIPRCCPSSFANIMKRCWDANPEKRPDMDEVVKLLEAIDTSKGGGMITEDQISCFCFRPARGP* | 399 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 21437707 | 21440975 | - | Chy1G015530.1 | Chy01g01553 | 218734 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy01g01553 | 398 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 22 | 391 | - | - | |
Chy01g01553 | 398 | SUPERFAMILY | Protein kinase-like (PK-like) | 74 | 370 | IPR011009 | - | |
Chy01g01553 | 398 | PANTHER | KINASE ATMRK1, PUTATIVE-RELATED | 22 | 391 | - | - | |
Chy01g01553 | 398 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 237 | 249 | IPR008271 | GO:0004672|GO:0006468 | |
Chy01g01553 | 398 | ProSiteProfiles | Protein kinase domain profile. | 92 | 373 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g01553 | 398 | CDD | STKc_MAP3K-like | 99 | 370 | - | - | |
Chy01g01553 | 398 | PRINTS | Tyrosine kinase catalytic domain signature | 231 | 249 | IPR001245 | GO:0004672|GO:0006468 | |
Chy01g01553 | 398 | PRINTS | Tyrosine kinase catalytic domain signature | 297 | 319 | IPR001245 | GO:0004672|GO:0006468 | |
Chy01g01553 | 398 | PRINTS | Tyrosine kinase catalytic domain signature | 193 | 206 | IPR001245 | GO:0004672|GO:0006468 | |
Chy01g01553 | 398 | PRINTS | Tyrosine kinase catalytic domain signature | 341 | 363 | IPR001245 | GO:0004672|GO:0006468 | |
Chy01g01553 | 398 | Gene3D | Transferase(Phosphotransferase) domain 1 | 196 | 386 | - | - | |
Chy01g01553 | 398 | SMART | serkin_6 | 92 | 373 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy01g01553 | 398 | Gene3D | Phosphorylase Kinase; domain 1 | 80 | 172 | - | - | |
Chy01g01553 | 398 | Pfam | Protein tyrosine and serine/threonine kinase | 100 | 370 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g01553 | Chy-Chr1:21437707 | Chy02g02571 | Chy-Chr2:28921622 | 0 | dispersed | |
Chy01g01553 | Chy-Chr1:21437707 | Chy06g00556 | Chy-Chr6:3814007 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71000 | PF07714 | PK_Tyr_Ser-Thr | 1.20E-56 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy01g01553 | - | - | csv:101207522 | 803.512 |