Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01553 ATGGATTTAGCGAATGGGGGCGAGGCCGGCAAGGCTCTGGTGGCTAATCAAGTAGCTAATATTGTTTCTGGTAAATCTAGCAAGACCCAAGAGAATGATTTGGGTTCAAAGTTGGGGACAGGAAGCAAAAGCAATAGGGATATGGTGTTTCGTGCTGATAAGATTGATTTCAAGAGTTGGGATATTCAGCTGGAGAAGCACTTGAGCAGGGCTTGGTCAAGGGACAGGGAAGTGCCTGCTAAAAAGGAAGAATGGGAGATTGACTTGTCTAAACTTGATATCAGATATGTTAAAGCTCATGGAACTTACGGTACTATTTACAGAGGAAACTATGATGGCAACGATGTTGCAGTGAAAGTGCTTGATTGGGGGGTGGATGGTGTTTCCTCAGTCGCTGAAATCGCTGCTCTTCGAACATCTTTTCGCCAGGAAGTTGCTGTATGGCATAAGCTTGACCATCCCAATGTTGCAAAGTTTTATGGAGCATCAATGGGGACGTCAAACCTTAAAATCCCTCCCAAAAGCTCATCATTCGACAGTAACCAAACTTTTCCTTCAAGGGCTTGCTGCGTTGTTGTTGAGTATCTTCCAGGTGGAACCCTAAAAAGCTTTTTAATCAAAAATAGGAAAAGGAAACTTGCATTTAAGGTTGTGATTCAACTTGCATTGGATCTTTCTAGAGGTTTGAGTTATCTACACTCCAAAAAGATTGTACACCGTGATATTAAAACAGAGAATGTTCTGCTAGATGCTCAGAAGACTCTGAAAATTGTTGATTTTGGCGTTGCTCGAGTCGAAGCACAGAACCCAAAGGATATGACTGGAGAGACTGGCACCCTTGGTTACATGGCCCCCGAGGTCCTTGATGGTAAGCCTTATAATCGGAAATGTGATGTTTACAGTCTTGGTATATGTTTGTGGGAAACATATTGCTGCGATATGCCTTACCCAGATCTCAGTTTTGCTGAAGTGTCTACTGCAGTTGTGCGGCAGAATTTACGACCAGAAATCCCTAGGTGCTGCCCAAGTTCGTTTGCAAATATCATGAAAAGATGTTGGGATGCAAATCCAGAAAAGCGACCCGACATGGATGAGGTCGTAAAATTGTTGGAAGCCATTGATACAAGTAAAGGGGGTGGCATGATTACTGAAGATCAGATTAGTTGTTTCTGTTTTCGCCCGGCTCGTGGTCCATAA 1197 43.36 MDLANGGEAGKALVANQVANIVSGKSSKTQENDLGSKLGTGSKSNRDMVFRADKIDFKSWDIQLEKHLSRAWSRDREVPAKKEEWEIDLSKLDIRYVKAHGTYGTIYRGNYDGNDVAVKVLDWGVDGVSSVAEIAALRTSFRQEVAVWHKLDHPNVAKFYGASMGTSNLKIPPKSSSFDSNQTFPSRACCVVVEYLPGGTLKSFLIKNRKRKLAFKVVIQLALDLSRGLSYLHSKKIVHRDIKTENVLLDAQKTLKIVDFGVARVEAQNPKDMTGETGTLGYMAPEVLDGKPYNRKCDVYSLGICLWETYCCDMPYPDLSFAEVSTAVVRQNLRPEIPRCCPSSFANIMKRCWDANPEKRPDMDEVVKLLEAIDTSKGGGMITEDQISCFCFRPARGP* 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 21437707 21440975 - Chy1G015530.1 Chy01g01553 218734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01553 398 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 22 391 - -
Chy01g01553 398 SUPERFAMILY Protein kinase-like (PK-like) 74 370 IPR011009 -
Chy01g01553 398 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 22 391 - -
Chy01g01553 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Chy01g01553 398 ProSiteProfiles Protein kinase domain profile. 92 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01553 398 CDD STKc_MAP3K-like 99 370 - -
Chy01g01553 398 PRINTS Tyrosine kinase catalytic domain signature 231 249 IPR001245 GO:0004672|GO:0006468
Chy01g01553 398 PRINTS Tyrosine kinase catalytic domain signature 297 319 IPR001245 GO:0004672|GO:0006468
Chy01g01553 398 PRINTS Tyrosine kinase catalytic domain signature 193 206 IPR001245 GO:0004672|GO:0006468
Chy01g01553 398 PRINTS Tyrosine kinase catalytic domain signature 341 363 IPR001245 GO:0004672|GO:0006468
Chy01g01553 398 Gene3D Transferase(Phosphotransferase) domain 1 196 386 - -
Chy01g01553 398 SMART serkin_6 92 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy01g01553 398 Gene3D Phosphorylase Kinase; domain 1 80 172 - -
Chy01g01553 398 Pfam Protein tyrosine and serine/threonine kinase 100 370 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01553 Chy-Chr1:21437707 Chy02g02571 Chy-Chr2:28921622 0 dispersed
Chy01g01553 Chy-Chr1:21437707 Chy06g00556 Chy-Chr6:3814007 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71000 PF07714 PK_Tyr_Ser-Thr 1.20E-56 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01553 - - csv:101207522 803.512