Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01556 ATGGGTAACGCTGATTACGTCTACCCATCCTCCGCGGCCACCGCAGGGGAAGGAGCCGACTGCTTACACAGGGCAGCCATTCCCCCGCCCCAGCCATTCCTCAAGTCACTCAAAAACGCTATGAAGGAGACCTTCTTTCCCGACGACCCACTCCGCCAGTTCAAGAATAAGCCGGCCGCCAAGAAGATCATATTGGGCTTCCAGTACTTTTTTCCTGTCGTCGAATGGGGGCCCAGGTATAATTTAGGGCTCTTCAAATCGGATCTTATTTCTGGTTTCACCATTGCTAGTCTAGCCATTCCTCAGGGGATTAGCTATGCTAAGCTCGCCAACTTGCCTCCCATACTTGGACTCTATTCGAGTTTTATTCCACCGTTAATTTATGCGATGATGGGAAGTTCAAGAGACTTAGCTGTCGGGACCGTTGCAGTGGCATCGCTTTTAATCAGCTCAATGTTAGGAGCAGAGGTTAACCCTGCTCAAAATCCCACTCTTTATCTCCACCTTGCTTTCACTGCCACTTTCTTTGCCGGAGTCTTCCAAGCCTCTTTAGGCCTTTTAAGGTTAGGGTTTATTGTTGATTTTTTGTCACATGCAACGATTGTTGGGTTCATGGCGGGTGCTGCCACAGTCGTGTGCCTACAACAACTCAAAGGCATCTTAGGGCTAACCCATTTCACCCACTCGACCGATCTCGTCTCCGTCCTTCGCTCCGTCTTCAGCCAAGTTCATGAGTGGAGATGGGAAAGTGGGGTGTTGGGATGCTGTTTTCTCTTCTTCCTCCTCATCACAAGATATTTTAGCAAGAAGAAGCCAAAATTCTTTTGGATATCAGCAATGGCACCTTTGACATCGGTGATTTTAGGAAGCCTTCTAGTGTTTCTGACTCATGCTGAAAAACATGGGGTGGAAGTGATTGGAGAATTGAAGAAAGGGGTAAATCCATTGTCAATAACAAAAATGGTGTTTGTGTCACCATACCTTTCAACTGCCATTAAAACTGGCATCATCACTGGCGTCATTGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCAATGTTCAAACATTACAACATTGATGGCAACAAGGAAATGGTAGCCATTGGCACTATGAACATTGTTGGCTCTTGCTTCTCCTGTTATCTCACCACAGGTCCATTTTCCCGATCGGCTGTGAATTACAATGCAGGATGCAAAACCGCAGTATCAAACGTCGTTATGGCGATTGCAGTGATGTTGACATTGCTGTTCTTGACTCCTCTGTTCCACTACACTCCTCTTGTGGTGCTTTCTTCCATCATCATTTCCGCCATGCTTGGCCTCATCGATTACGAAGCTGCTATTCACTTATGGAAAGTTGATAAATTCGATTTCCTTGTCTGTATTGGCGCTTATGCTGGTGTTGTCTTCGCCAGTGTTGAAATTGGATTGGTCATTGCGGTGGTGATATCTCTGCTTAGGTTACTTTTGTTCGTTGCTAGGCCGAGGACACTTGTGCTTGGGAACCTTCCCAATTCCACGGTTTACAGGAACATTGAGCAATACCCAAATGCCGGCAATGTTCCCGGCATTCTGATACTTGAGATTGACGCTCCCATTTACTTTGCTAATTCAAGCTACTTGAGAGAGAGGATTATGAGGTGGGTTGATGAAGAGGAAGATAGGATAAAAGCTTCCAGTGAAAGTACGTTACAATATGTCGTATTGGACATGAGTGCTGTTGGCAACATTGATACAAGTGGAATAAGCATGTTTGAAGAGTTGAAGAAGATTTTAGAAAGAAGGGGATTGAAGATAATTTTGGCCAACCCTGGGGCTGAAGTAATGAAGAAGTTGGACAAGGGCAAGTTCATCGAGACCCTTGGACATGAATGGATCTATCTTACAGTCGCCGAAGCTGTTGCGGCCTGCAATTATATGCTTCACTCTTGCAAACCAAACCTTGTAACCGATGAGAAAGCTGAGCCATGGAACAATGTCTAA 1989 45.7 MGNADYVYPSSAATAGEGADCLHRAAIPPPQPFLKSLKNAMKETFFPDDPLRQFKNKPAAKKIILGFQYFFPVVEWGPRYNLGLFKSDLISGFTIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVASLLISSMLGAEVNPAQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHSTDLVSVLRSVFSQVHEWRWESGVLGCCFLFFLLITRYFSKKKPKFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGVNPLSITKMVFVSPYLSTAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNIVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTVYRNIEQYPNAGNVPGILILEIDAPIYFANSSYLRERIMRWVDEEEDRIKASSESTLQYVVLDMSAVGNIDTSGISMFEELKKILERRGLKIILANPGAEVMKKLDKGKFIETLGHEWIYLTVAEAVAACNYMLHSCKPNLVTDEKAEPWNNV* 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 21486310 21493935 - Chy1G015560.1 Chy01g01556 218737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01556 662 Pfam Sulfate permease family 85 464 IPR011547 GO:0016021
Chy01g01556 662 TIGRFAM sulP: sulfate permease 72 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy01g01556 662 ProSiteProfiles STAS domain profile. 516 639 IPR002645 -
Chy01g01556 662 CDD STAS_SulP_like_sulfate_transporter 517 632 - -
Chy01g01556 662 PANTHER SULFATE TRANSPORTER 2 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy01g01556 662 SUPERFAMILY SpoIIaa-like 523 640 IPR036513 -
Chy01g01556 662 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
Chy01g01556 662 Gene3D STAS domain 496 642 IPR036513 -
Chy01g01556 662 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 655 - -
Chy01g01556 662 Pfam STAS domain 517 635 IPR002645 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01556 Chy-Chr1:21486310 Chy07g00704 Chy-Chr7:6877474 0 dispersed
Chy01g02056 Chy-Chr1:25423469 Chy01g01556 Chy-Chr1:21486310 0 transposed
Chy02g01908 Chy-Chr2:22154099 Chy01g01556 Chy-Chr1:21486310 0 transposed
Chy01g01556 Chy-Chr1:21486310 Chy06g00551 Chy-Chr6:3756750 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01556 K17471 - csv:101222260 1289.63