Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy01g01625 ATGCTTCCGTGGGGAGGTATTAGCTGCTGTTTGAGTGCAGCTGCTCTTTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTACTGAAATCTGTCACGCGGGTCAATCAGTTGAAGGAATTGGCTCAATTGCTTGAGGCAGAACATTTGTTACCTTTGGTCGTTGCAATTTCTGGAAGAGTTAGCTCTGATACACCAATAAATTGTGAATTTAGTGGTTTAAGGGGTGTAATTGTGGAGGAAACGGCAGAACAACATTTTCTAAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGCAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCGTTTGTGCTGGGAGCTCGAAGTGCCACAAATTTTATATTACCAGTAGTGAGTGAGGTATTTGAAGAATCTGGCAGATCCCTTATGCGTGGCACTTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCGAATTGAGCGTGTTCTACCTACTGGTACTTCCTTGACTGTTGTTGGTGAGGCTGCCAAAGATGACATTGGTACAATCAGAATTCAACGTCCACACAAGGGACCATTTTATGTCTCCCCAAAAACCATTGATCAACTCATAAGCAATCTTGGGAAGTGGGCCAGGTGGTACAAGTACGCTTCCGTGGGCTTGAGTATATTTGGTTTGTATCTGGTTACAAAGCATGTCATTCTTTATCTCTTGGAGAGAAGGCGTCGCTGGGAATTGCAGAAAAGGGTCCTCGCTGCAGCTGCCAAAAGATCAAGCCAAGAAAATGAAGGGGAAATTGAAAAGGCCAGCAATGGAACAGATGGTACAAAGAGAGACCGGTCAATGCCAGATCTTTGTGTAATATGTCTCGAGAGAGACTACAATGCTGTTTTTGTCCCGTAA 930 44.73 MLPWGGISCCLSAAALYLLGRSSGRDAELLKSVTRVNQLKELAQLLEAEHLLPLVVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVLGARSATNFILPVVSEVFEESGRSLMRGTLDYLQGLKMLGVKRIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASVGLSIFGLYLVTKHVILYLLERRRRWELQKRVLAAAAKRSSQENEGEIEKASNGTDGTKRDRSMPDLCVICLERDYNAVFVP* 310
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 22219745 22226251 - Chy1G016250.1 Chy01g01625 218806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy01g01625 309 Pfam E3 Ubiquitin ligase 86 235 IPR022170 GO:0004842|GO:0006996|GO:0016567
Chy01g01625 309 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SP1-RELATED 1 309 - -
Chy01g01625 309 PANTHER - 1 309 IPR044231 GO:0004842|GO:0016567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy01g01625 K15688 - csv:101218196 576.63